RNA–Protein interactions for RNA: ENST00000417243.5

TRAPPC12-206, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 1,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-206ENST00000417243 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 TBCBQ99426 244 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 LZTFL1Q9NQ48 299 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 CAPN6Q9Y6Q1 641 aa13.08□□□□□ -0.32
TRAPPC12-206ENST00000417243 GRID2IPA4D2P6 1211 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 M0QYT0 321 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 BUB1O43683 1085 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 LRCH4O75427 683 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 MOCS3O95396 460 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 GBP1P32455 592 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 RDXP35241 583 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 HDAC4P56524 1084 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 EFEMP1Q12805 493 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 C15orf59Q2T9L4 293 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 STXBP5Q5T5C0 1151 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 GPR158Q5T848 1215 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZSCAN30Q86W11 494 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 SYCE1Q8N0S2 351 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 KIAA1958Q8N8K9 716 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 MAB21L3Q8N8X9 362 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 TRIM58Q8NG06 486 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 FAM172AQ8WUF8 416 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 HLA-CQ95604 372 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC39A13Q96H72 371 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 BTBD6Q96KE9 485 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZFRQ96KR1 1074 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 APOL5Q9BWW9 433 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 FAM204AQ9H8W3 233 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 TRMT1Q9NXH9 659 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 CALCOCO1Q9P1Z2 691 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 CDH22Q9UJ99 828 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ARHGAP26Q9UNA1 814 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 TLR6Q9Y2C9 796 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 USP15Q9Y4E8 981 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 PAXBP1Q9Y5B6 917 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 ZFP37Q9Y6Q3 630 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 SPTBN5Q9NRC6 3674 aaKnown RBP13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
TRAPPC12-206ENST00000417243 RNF8O76064 485 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 TBX18O95935 607 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 GJA1P17302 382 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 HDCP19113 662 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 TFE3P19532 575 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 CXCR3P49682 368 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 AIF1P55008 147 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 COG7P83436 770 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 ATP11AP98196 1134 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 DEUP1Q05D60 604 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 USP4Q13107 963 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 MTA1Q13330 715 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 MESDQ14696 234 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 CBX2Q14781 532 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 CCDC85BQ15834 202 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 LEXMQ3ZCV2 418 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 BRMS1LQ5PSV4 323 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 EP400NLQ6ZTU2 488 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 ARFGAP1Q8N6T3 406 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 ARL14EPQ8N8R7 260 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 FGF13Q92913 245 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 NTAN1Q96AB6 310 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 PLD4Q96BZ4 506 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 KLF16Q9BXK1 252 aaPredicted RBP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC46A2Q9BY10 475 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 RNF38Q9H0F5 515 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 POMKQ9H5K3 350 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 TRPV4Q9HBA0 871 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 TRPC7Q9HCX4 862 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 PIGVQ9NUD9 493 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 RASAL2Q9UJF2 1139 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 NUDT5Q9UKK9 219 aa13.06□□□□□ -0.32
TRAPPC12-206ENST00000417243 GRXCR2A6NFK2 248 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 H3BQ06 376 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 MDM4O15151 490 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 MSI1O43347 362 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 MBTPS2O43462 519 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 LATS1O95835 1130 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 CKMP06732 381 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC2A3P11169 496 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 MBL2P11226 248 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 KCNA5P22460 613 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 AVPR1AP37288 418 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 NAP1L1P55209 391 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SCAPQ12770 1279 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 CDO1Q16878 200 aa13.05□□□□□ -0.32
TRAPPC12-206ENST00000417243 SH3PXD2AQ5TCZ1 1133 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms