RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 BSPRYQ5W0U4 402 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 RHBDF2Q6PJF5 856 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 TAS1R1Q7RTX1 841 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ATAD1Q8NBU5 361 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZNF333Q96JL9 665 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 SH3GL2Q99962 352 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 NCAPGQ9BPX3 1015 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 COLEC11Q9BWP8 271 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ADAM7Q9H2U9 754 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 EPB41L4BQ9H329 900 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 PRDM5Q9NQX1 630 aaPredicted RBP11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ETNK2Q9NVF9 386 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 SHROOM3Q8TF72 1996 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 GOLGA6CA6NDK9 693 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 OAZ2O95190 189 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ACSL3O95573 720 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 GALTP07902 379 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 GOLGA6DP0CG33 693 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 PAX3P23760 479 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC5A3P53794 718 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ROR1Q01973 937 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 GBE1Q04446 702 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZNF844Q08AG5 666 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 NOMO1Q15155 1222 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 BCL7CQ8WUZ0 217 aaPredicted RBP11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 NT5C3BQ969T7 300 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 CSPG4P5Q96PW8 444 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZNF670Q9BS34 389 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ZCWPW1Q9H0M4 648 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 PABPC3Q9H361 631 aaKnown RBP11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 GOLGA6AQ9NYA3 693 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 ADAM21Q9UKJ8 722 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 SNX10Q9Y5X0 201 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 NR2E3Q9Y5X4 410 aa11.09□□□□□ -0.63
SMPD4P1-201ENST00000416717 DNALI1O14645 258 aaPredicted RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 CXCL10P02778 98 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 CPB1P15086 417 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 RPL22P35268 128 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 ARL4AP40617 200 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLC10A2Q12908 348 aaPredicted RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 DENND2CQ68D51 928 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 FUT10Q6P4F1 479 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 CRIPAKQ8N1N5 446 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 PCDH9Q9HC56 1237 aa11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
SMPD4P1-201ENST00000416717 TLDC2A0PJX2 215 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM72CH0Y354 149 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 I6L893 689 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 KCNN4O15554 427 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RBL1P28749 1068 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 CTCFP49711 727 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 GAD2Q05329 585 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 IKBKEQ14164 716 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLMAPQ14BN4 828 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 LRRC26Q2I0M4 334 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 KRT71Q3SY84 523 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 EFHC2Q5JST6 749 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RTP2Q5QGT7 225 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM72AQ5TYM5 149 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SLC9A4Q6AI14 798 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 PM20D1Q6GTS8 502 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM72DQ6L9T8 149 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 HIBCHQ6NVY1 386 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 PRSS55Q6UWB4 352 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RSPO2Q6UXX9 243 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 TAC4Q86UU9 113 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAM72BQ86X60 149 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RNF34Q969K3 372 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 WDR6Q9NNW5 1121 aaKnown RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 TBX21Q9UL17 535 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 MRPL42Q9Y6G3 142 aaKnown RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SF3B1O75533 1304 aaKnown RBP eCLIP11.07□□□□□ -0.644e-6■■■■■ 62.7
SMPD4P1-201ENST00000416717 GOLGA6L10A6NI86 522 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 GOLGA8KD6RF30 607 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 C2CD2LO14523 706 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SYN3O14994 580 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RIPK2O43353 540 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RARGP13631 454 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 TGM2P21980 687 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 BASP1P80723 227 aaKnown RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 KYNUQ16719 465 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SPOUT1Q5T280 376 aaKnown RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 ZNF280DQ6N043 979 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 BBOF1Q8ND07 529 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 CCHCR1Q8TD31 782 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 RNF139Q8WU17 664 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FAF2Q96CS3 445 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 C9orf72Q96LT7 481 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 FRMD8P1Q9BZ68 369 aaPredicted RBP11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 SFMBT1Q9UHJ3 866 aa11.07□□□□□ -0.64
SMPD4P1-201ENST00000416717 TNFRSF10BO14763 440 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms