RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 KRT19P08727 400 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 ACO1P21399 889 aaKnown RBP16.68■□□□□ 0.26
CPNE1-208ENST00000414711 PRKCHP24723 683 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 EPHA8P29322 1005 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-208ENST00000414711 ERVPABLB-1P60509 514 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 NFKB2Q00653 900 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 MDH1BQ5I0G3 518 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 SLFN12LQ6IEE8 588 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 HTR3DQ70Z44 454 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 UCMAQ8WVF2 138 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 FAM84AQ96KN4 292 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 ORAI3Q9BRQ5 295 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 ODF2LQ9ULJ1 636 aa16.68■□□□□ 0.26
CPNE1-208ENST00000414711 EPB41L2O43491 1005 aaKnown RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 GREM1O60565 184 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 RTN3O95197 1032 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 MT-CO3P00414 261 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 PDGFRBP09619 1106 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 CKMT2P17540 419 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 RACK1P63244 317 aaKnown RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 GUCY1B3Q02153 619 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 UBAP2LQ14157 1087 aaKnown RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 ZNF234Q14588 700 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 NECAB1Q8N987 351 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 NSUN7Q8NE18 718 aaKnown RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 SLC6A18Q96N87 628 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 REEP2Q9BRK0 252 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 BACH2Q9BYV9 841 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 BTBD1Q9H0C5 482 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 KCNK4Q9NYG8 393 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 PLK2Q9NYY3 685 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 SSUH2Q9Y2M2 353 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 SLC27A6Q9Y2P4 619 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 STYXL1Q9Y6J8 313 aa16.67■□□□□ 0.26
CPNE1-208ENST00000414711 TLN1Q9Y490 2541 aaKnown RBP16.67■□□□□ 0.26
CPNE1-208ENST00000414711 JAK2O60674 1132 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 AFPP02771 609 aaKnown RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 EPHX1P07099 455 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 PLA2G4BP0C869 781 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 MYF5P13349 255 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 MFAP3P55082 362 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 RBP5P82980 135 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 GEN1Q17RS7 908 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 ARSHQ5FYA8 562 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 SNX30Q5VWJ9 437 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 DPH6Q7L8W6 267 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 LIMS2Q7Z4I7 341 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 NUP93Q8N1F7 819 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 EXD3Q8N9H8 876 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 OR2T3Q8NH03 318 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 CACTINQ8WUQ7 758 aaKnown RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 SKA1Q96BD8 255 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 VCPIP1Q96JH7 1222 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 ZNF518BQ9C0D4 1074 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 ELOVL4Q9GZR5 314 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 UPF2Q9HAU5 1272 aaKnown RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 PARVGQ9HBI0 331 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 THSD1Q9NS62 852 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 SIX4Q9UIU6 781 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
CPNE1-208ENST00000414711 USP9YO00507 2555 aaPredicted RBP16.66■□□□□ 0.26
CPNE1-208ENST00000414711 SUV39H1O43463 412 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 FAM13AO94988 1023 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 ACP1P24666 158 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 ABCD1P33897 745 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 ARRB1P49407 418 aaPredicted RBP16.65■□□□□ 0.26
CPNE1-208ENST00000414711 GRIN1Q05586 938 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 SERPINA13PQ6UXR4 307 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 POMGNT1Q8WZA1 660 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 GTF3C6Q969F1 213 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 PLIN2Q99541 437 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 ASCL3Q9NQ33 180 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 STARD5Q9NSY2 213 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 PAXBP1Q9Y5B6 917 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 CREBBPQ92793 2442 aa16.65■□□□□ 0.26
CPNE1-208ENST00000414711 ENO4A6NNW6 628 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 TLR5O60602 858 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 IGHV4-34P06331 123 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 WARSP23381 471 aaKnown RBP16.64■□□□□ 0.25
CPNE1-208ENST00000414711 LSSP48449 732 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 ZNF131P52739 623 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 GTF2BQ00403 316 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 E2F1Q01094 437 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 SERINC3Q13530 473 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 E2F5Q15329 346 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 IL17AQ16552 155 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 C4orf17Q53FE4 359 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 HYIQ5T013 277 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 SFMBT2Q5VUG0 894 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 ANKS1BQ7Z6G8 1248 aa16.64■□□□□ 0.25
CPNE1-208ENST00000414711 BRSK2Q8IWQ3 736 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms