RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 TRIML1Q8N9V2 468 aa25.64■■□□□ 1.7
AC005540.1-201ENST00000413911 DUSP16Q9BY84 665 aa25.64■■□□□ 1.7
AC005540.1-201ENST00000413911 MMRN2Q9H8L6 949 aa25.64■■□□□ 1.7
AC005540.1-201ENST00000413911 USP25Q9UHP3 1055 aa25.64■■□□□ 1.7
AC005540.1-201ENST00000413911 UPK3BL1B0FP48 263 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 UPK3BL2E5RIL1 263 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 RHOBTB3O94955 611 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 HSP90AA1P07900 732 aaKnown RBP25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 GFPT1Q06210 699 aaPredicted RBP25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 ZNF394Q53GI3 561 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 SDE2Q6IQ49 451 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 CEP76Q8TAP6 659 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 SEMA4DQ92854 862 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 HSPA12BQ96MM6 686 aa25.63■■□□□ 1.69
AC005540.1-201ENST00000413911 HYAL3O43820 417 aaPredicted RBP25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 ZNF217O75362 1048 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 PENKP01210 267 aaPredicted RBP25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 MYL1P05976 194 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 NDUFA8P51970 172 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 DPYDQ12882 1025 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 FYB2Q5VWT5 728 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 INTS8Q75QN2 995 aaKnown RBP25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 FAM186BQ8IYM0 893 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 ZNF276Q8N554 614 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 ZNF419Q96HQ0 510 aaPredicted RBP25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 SLC32A1Q9H598 525 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 ZDHHC9Q9Y397 364 aa25.62■■□□□ 1.69
AC005540.1-201ENST00000413911 FAM237AA0A1B0GTK4 181 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 KIF20AO95235 890 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 MCCD1P59942 119 aaPredicted RBP25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 SIM1P81133 766 aaPredicted RBP25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 GEN1Q17RS7 908 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 MINDY1Q8N5J2 469 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 IMPG2Q9BZV3 1241 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 CLIC5Q9NZA1 410 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 CLEC4EQ9ULY5 219 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 STON1Q9Y6Q2 735 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 DMXL2Q8TDJ6 3036 aa25.61■■□□□ 1.69
AC005540.1-201ENST00000413911 GFRA2O00451 464 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 ARHGAP33O14559 1287 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 HMBSP08397 361 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 CD59P13987 128 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 SYKP43405 635 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 ATXN3P54252 364 aaPredicted RBP25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 MFAP3P55082 362 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 ZCWPW2Q504Y3 356 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 TMEM8AQ9HCN3 771 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 RASAL2Q9UJF2 1139 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 KLK13Q9UKR3 277 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 SLC27A6Q9Y2P4 619 aa25.6■■□□□ 1.69
AC005540.1-201ENST00000413911 A0A1W2PQD8 194 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 MAOBP27338 520 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 PSMC2P35998 433 aaKnown RBP25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 IL12RB1P42701 662 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 PSEN1P49768 467 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 EFEMP1Q12805 493 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 ADAM9Q13443 819 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 FUT11Q495W5 492 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 KIAA1324Q6UXG2 1013 aaKnown RBP25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 HDDC3Q8N4P3 179 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 SLC4A11Q8NBS3 891 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 EEF2KMTQ96G04 330 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 SPATA32Q96LK8 384 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 HEXIM2Q96MH2 286 aaKnown RBP25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 ARID3AQ99856 593 aa25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 MKRN2Q9H000 416 aaKnown RBP25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 AGO1Q9UL18 857 aaKnown RBP25.59■■□□□ 1.69
AC005540.1-201ENST00000413911 ZFYVE26Q68DK2 2539 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 ZBTB24O43167 697 aaPredicted RBP25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 OPHN1O60890 802 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 GJB3O75712 270 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 RALAP11233 206 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 KRT13P13646 458 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 TRIM21P19474 475 aaKnown RBP25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 CORO1AP31146 461 aaKnown RBP25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 RAD23BP54727 409 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 ENPEPQ07075 957 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 ENPP2Q13822 863 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 GUF1Q8N442 669 aaKnown RBP25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 CAMK1GQ96NX5 476 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 GOLPH3LQ9H4A5 285 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 THAP10Q9P2Z0 257 aaPredicted RBP25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 FAM208BQ5VWN6 2430 aa25.58■■□□□ 1.69
AC005540.1-201ENST00000413911 KCNJ18B7U540 433 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 RAB41Q5JT25 222 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 KRT39Q6A163 491 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 PIGZQ86VD9 579 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 RBBP8NLQ8NC74 664 aaPredicted RBP25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 NDRG1Q92597 394 aaKnown RBP25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 TATDN2Q93075 761 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 PIWIL1Q96J94 861 aaKnown RBP25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 CISHQ9NSE2 258 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 DNAAF2Q9NVR5 837 aaKnown RBP25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 NEUROG3Q9Y4Z2 214 aa25.57■■□□□ 1.68
AC005540.1-201ENST00000413911 FREM2Q5SZK8 3169 aa25.56■■□□□ 1.68
AC005540.1-201ENST00000413911 TULP2O00295 520 aa25.56■■□□□ 1.68
AC005540.1-201ENST00000413911 NDUFS2O75306 463 aa25.56■■□□□ 1.68
AC005540.1-201ENST00000413911 COG7P83436 770 aa25.56■■□□□ 1.68
AC005540.1-201ENST00000413911 KRBA2Q6ZNG9 492 aa25.56■■□□□ 1.68
AC005540.1-201ENST00000413911 BHLHA9Q7RTU4 235 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms