RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 TAS1R3Q7RTX0 852 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TMEM192Q8IY95 271 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TFB1MQ8WVM0 346 aaKnown RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 R3HDMLQ9H3Y0 253 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 GOLPH3Q9H4A6 298 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 SAYSD1Q9NPB0 183 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 IL23AQ9NPF7 189 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 GDAP2Q9NXN4 497 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 DNMT3LQ9UJW3 386 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TELO2Q9Y4R8 837 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 NRP1O14786 923 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TRUB2O95900 331 aaKnown RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 JAM2P57087 298 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 VSNL1P62760 191 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 MRPS5P82675 430 aaKnown RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 MAMLD1Q13495 774 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 LMNTD2Q8IXW0 634 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 C12orf29Q8N999 325 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 ACTRT1Q8TDG2 376 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 IRGQQ8WZA9 623 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 VPS39Q96JC1 886 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 FAM84AQ96KN4 292 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TRAIPQ9BWF2 469 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TLE6Q9H808 572 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 PPCSQ9HAB8 311 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 WBP1LQ9NX94 342 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TTC7AQ9ULT0 858 aaPredicted RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 TFR2Q9UP52 801 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 NCANO14594 1321 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 POC1B-GALNT4F8VUJ3 575 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 STBD1O95210 358 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 HOXD8P13378 290 aaPredicted RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 IRX5P78411 483 aaPredicted RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 TMED1Q13445 227 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 CFAP157Q5JU67 520 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TPGS2Q68CL5 300 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 RPAINQ86UA6 219 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 TRPV1Q8NER1 839 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 DDI1Q8WTU0 396 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 ASIC4Q96FT7 647 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 FIZ1Q96SL8 496 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 AGO3Q9H9G7 860 aaKnown RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 ACP6Q9NPH0 428 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 PSD3Q9NYI0 1048 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 PCDHGC5Q9Y5F6 944 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 PCDHA3Q9Y5H8 950 aa8.82□□□□□ -1
SYNE1-211ENST00000413186 KIAA0100Q14667 2235 aaKnown RBP8.82□□□□□ -1
SYNE1-211ENST00000413186 KIF1CO43896 1103 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 VNN1O95497 513 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 CHRNA1P02708 482 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 ADCY1Q08828 1119 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 TIGD5Q53EQ6 642 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 FAM183BPQ6ZVS7 135 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 SLC4A11Q8NBS3 891 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 ZSWIM2Q8NEG5 633 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 ZNF516Q92618 1163 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 HINFPQ9BQA5 517 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 APOBEC3GQ9HC16 384 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.81□□□□□ -1
SYNE1-211ENST00000413186 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 POLR2AP24928 1970 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 EXOC1LA0A1B0GW35 172 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 DAB1O75553 588 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 ANXA9O76027 345 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 TGM2P21980 687 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 IGFBP4P22692 258 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 MATKP42679 507 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 AIF1P55008 147 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 SFSWAPQ12872 951 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 ANGPT1Q15389 498 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 KCNT1Q5JUK3 1230 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 CCT6BQ92526 530 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 MS4A14Q96JA4 679 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 STRA6Q9BX79 667 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 MRPS23Q9Y3D9 190 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 TTLL13PA6NNM8 815 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 SUN1O94901 812 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 RHOCP08134 193 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 MIPP30301 263 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 DUSP4Q13115 394 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 PLPP4Q5VZY2 271 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 CRYBG2Q8N1P7 616 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 RMDN1Q96DB5 314 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 SAMD11Q96NU1 681 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 ZNF185O15231 689 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 CRCPO75575 148 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 LUC7L3O95232 432 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 RARGP13631 454 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 HDCP19113 662 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 FDFT1P37268 417 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 PAPOLAP51003 745 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 RETSATQ6NUM9 610 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 DDX53Q86TM3 631 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 ATP11CQ8NB49 1132 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 UHMK1Q8TAS1 419 aaKnown RBP8.81□□□□□ -1
SYNE1-211ENST00000413186 TTYH3Q9C0H2 523 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 IGFLR1Q9H665 355 aa8.81□□□□□ -1
SYNE1-211ENST00000413186 VRTNQ9H8Y1 702 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms