RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 STK32AQ8WU08 396 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 PLD4Q96BZ4 506 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 BBS2Q9BXC9 721 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 NAA15Q9BXJ9 866 aaKnown RBP19.7■□□□□ 0.74
TRIM56-202ENST00000412507 SEMA4AQ9H3S1 761 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 ARHGEF4Q9NR80 690 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 AGO1Q9UL18 857 aaKnown RBP19.7■□□□□ 0.74
TRIM56-202ENST00000412507 ZNF510Q9Y2H8 683 aa19.7■□□□□ 0.74
TRIM56-202ENST00000412507 EP300Q09472 2414 aaPredicted RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 E5RJQ4 531 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 MSI1O43347 362 aaKnown RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 TYRP14679 529 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 UCHL3P15374 230 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 FNTBP49356 437 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 KLK7P49862 253 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 C2orf27AQ580R0 203 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 HEATR6Q6AI08 1181 aaKnown RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 SMYD5Q6GMV2 418 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 DENND1CQ8IV53 801 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 PASD1Q8IV76 773 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 PHTF2Q8N3S3 785 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 WDTC1Q8N5D0 677 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 GOLGA1Q92805 767 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 MARK1Q9P0L2 795 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 LIMA1Q9UHB6 759 aaKnown RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 PCDHGC3Q9UN70 934 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 SLC8A2Q9UPR5 921 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 HBS1LQ9Y450 684 aaKnown RBP19.69■□□□□ 0.74
TRIM56-202ENST00000412507 ZNF292O60281 2723 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 OTOGLQ3ZCN5 2332 aa19.69■□□□□ 0.74
TRIM56-202ENST00000412507 SDK1Q7Z5N4 2213 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 TRIM24O15164 1050 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 LILRB5O75023 590 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 LMNAP02545 664 aaKnown RBP19.68■□□□□ 0.74
TRIM56-202ENST00000412507 CDK11BP21127 795 aaKnown RBP19.68■□□□□ 0.74
TRIM56-202ENST00000412507 GRIA2P42262 883 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 PDCLQ13371 301 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 TRIP4Q15650 581 aaPredicted RBP19.68■□□□□ 0.74
TRIM56-202ENST00000412507 FKBP15Q5T1M5 1219 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 MSANTD2Q6P1R3 559 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 TMEM110Q86TL2 294 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 ANKRD20A12PQ8NF67 263 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 USP33Q8TEY7 942 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 BHMTQ93088 406 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 XPO6Q96QU8 1125 aaKnown RBP19.68■□□□□ 0.74
TRIM56-202ENST00000412507 GANQ9H2C0 597 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 HSD3B7Q9H2F3 369 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 PLCB1Q9NQ66 1216 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 PLK2Q9NYY3 685 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 WDR35Q9P2L0 1181 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 DEC1Q9P2X7 70 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 TJP2Q9UDY2 1190 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 CEP192Q8TEP8 1941 aa19.68■□□□□ 0.74
TRIM56-202ENST00000412507 FRYLO94915 3013 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 A0A0A0MRY4 1105 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 PAPSS1O43252 624 aaPredicted RBP19.67■□□□□ 0.74
TRIM56-202ENST00000412507 CACNG3O60359 315 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 FYNP06241 537 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 NCAM1P13591 858 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 ZNF18P17022 549 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 KRT9P35527 623 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 CHKAP35790 457 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 CCDC26Q8TAB7 109 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 ACDQ96AP0 544 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 FAM149B1Q96BN6 582 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 P2RY11Q96G91 374 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 STK33Q9BYT3 514 aa19.67■□□□□ 0.74
TRIM56-202ENST00000412507 DNAJC17Q9NVM6 304 aaKnown RBP19.67■□□□□ 0.74
TRIM56-202ENST00000412507 THADAQ6YHU6 1953 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 TBC1D3BA6NDS4 549 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 SART1O43290 800 aaKnown RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 TIE1P35590 1138 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 PXNP49023 591 aaPredicted RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 HARS2P49590 506 aaKnown RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 BPIFB4P59827 614 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 DMC1Q14565 340 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 EMC10Q5UCC4 262 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 GRAMD4Q6IC98 578 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 SYT13Q7L8C5 426 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 CCDC33Q8N5R6 958 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 C1orf131Q8NDD1 294 aaKnown RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 PPP1R13BQ96KQ4 1090 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 HHIPQ96QV1 700 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 CPXM1Q96SM3 734 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 NAT10Q9H0A0 1025 aaKnown RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 LHX5Q9H2C1 402 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 FAM207AQ9NSI2 230 aaPredicted RBP19.66■□□□□ 0.74
TRIM56-202ENST00000412507 NAALADL1Q9UQQ1 740 aa19.66■□□□□ 0.74
TRIM56-202ENST00000412507 HOXA6P31267 233 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 TNFRSF4P43489 277 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 POLR2FP61218 127 aaKnown RBP19.65■□□□□ 0.74
TRIM56-202ENST00000412507 MRPS21P82921 87 aaKnown RBP19.65■□□□□ 0.74
TRIM56-202ENST00000412507 PREPLQ4J6C6 727 aaPredicted RBP19.65■□□□□ 0.74
TRIM56-202ENST00000412507 LONP2Q86WA8 852 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 TERB1Q8NA31 727 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 SUMF1Q8NBK3 374 aa19.65■□□□□ 0.74
TRIM56-202ENST00000412507 DQX1Q8TE96 717 aaKnown RBP19.65■□□□□ 0.74
TRIM56-202ENST00000412507 PIWIL1Q96J94 861 aaKnown RBP19.65■□□□□ 0.74
TRIM56-202ENST00000412507 ZDHHC4Q9NPG8 344 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms