RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ESRRGP62508 458 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 PPP3CAQ08209 521 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC39A12Q504Y0 691 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 DEFB106AQ8N104 65 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ACTL9Q8TC94 416 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 ATXN3LQ9H3M9 355 aa17.31■□□□□ 0.36
PCDHA13-202ENST00000409494 A0A0B4J269 797 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 BTNL10A8MVZ5 291 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 SMIM22K7EJ46 135 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 MAP2K7O14733 419 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 MLH1P40692 756 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 RAD23BP54727 409 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 AIF1P55008 147 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CDK16Q00536 496 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 SPDL1Q96EA4 605 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 ZCCHC2Q9C0B9 1178 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 MAFBQ9Y5Q3 323 aaPredicted RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 DDX3XO00571 662 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 JCHAINP01591 159 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 HNRNPH1P31943 449 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 GRAMD1BQ3KR37 738 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 DENND5BQ6ZUT9 1274 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 SPPL2BQ8TCT7 592 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 RAD18Q9NS91 495 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CD274Q9NZQ7 290 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CYP3A5P20815 502 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 KATNAL2Q8IYT4 538 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 NCLNQ969V3 563 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 RNPEPQ9H4A4 650 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CHKAP35790 457 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 POLR2LP62875 67 aaKnown RBP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CDH17Q12864 832 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CBWD6Q4V339 395 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CBWD3Q5JTY5 395 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CBWD5Q5RIA9 395 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC24A5Q71RS6 500 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 MDM1Q8TC05 714 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 TSC22D3Q99576 134 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 GANQ9H2C0 597 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 CASS4Q9NQ75 786 aa17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 RBM22Q9NW64 420 aaKnown RBP eCLIP17.3■□□□□ 0.36
PCDHA13-202ENST00000409494 ACAT1P24752 427 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 WASHC5Q12768 1159 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 HECTD3Q5T447 861 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 EMC1Q8N766 993 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 EIF1ADQ8N9N8 165 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 SPATA20Q8TB22 786 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC26A7Q8TE54 656 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 EPS8L1Q8TE68 723 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 LRRC39Q96DD0 335 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 PRPF18Q99633 342 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 DHX33Q9H6R0 707 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 SLC40A1Q9NP59 571 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 ATP5BP06576 529 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 SERPINB8P50452 374 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 C1orf146Q5VVC0 180 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 ERAP2Q6P179 960 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 TSHZ1Q6ZSZ6 1077 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 ST13P4Q8IZP2 240 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 VPS37AQ8NEZ2 397 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 OTUB1Q96FW1 271 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 CLK2P49760 499 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 ZNF662Q6ZS27 426 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 CLPBQ9H078 707 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 MARCH2Q9P0N8 246 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 SEPT3Q9UH03 358 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 IGSF6O95976 241 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 RBP1P09455 135 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 KCNT1Q5JUK3 1230 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 PHF13Q86YI8 300 aaPredicted RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 BLOC1S5Q8TDH9 187 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 TLR10Q9BXR5 811 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 KCTD10Q9H3F6 313 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 PRDM4Q9UKN5 801 aa17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
PCDHA13-202ENST00000409494 ZSCAN5CA6NGD5 496 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 TRPC5OSA6NMA1 111 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 SYCE1LA8MT33 242 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 CLASP2O75122 1294 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 TUBP50607 506 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 NAB1Q13506 487 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 RRP1BQ14684 758 aaKnown RBP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 HIPK4Q8NE63 616 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 CNGB3Q9NQW8 809 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 RBAK-RBAKDNI3L0D1 243 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 APOC4-APOC2K7ER74 178 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 APOC2P02655 101 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 KITP10721 976 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 B3GALNT2Q8NCR0 500 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 FAM161BQ96MY7 647 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 ULBP1Q9BZM6 244 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 OSGEPQ9NPF4 335 aa17.28■□□□□ 0.36
PCDHA13-202ENST00000409494 WSCD1Q658N2 575 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms