RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ARL13BQ3SXY8 428 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 OGFOD2Q6N063 350 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TRIM72Q6ZMU5 477 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 BNC2Q6ZN30 1099 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CYP2U1Q7Z449 544 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MAPKAPK5Q8IW41 473 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 SLC35B2Q8TB61 432 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TMEM79Q9BSE2 394 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 C1orf50Q9BV19 199 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 C20orf27Q9GZN8 174 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MAN1C1Q9NR34 630 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MTMR4Q9NYA4 1195 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 VAV3Q9UKW4 847 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 SNX9Q9Y5X1 595 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 hCG_1818297A0A087WSY0 165 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L15C9J2P7 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L13C9JLJ4 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 KBTBD13C9JR72 458 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L11C9JVI0 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L18D6R9N7 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L22D6RA61 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L17D6RBQ6 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L19D6RCP7 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L20D6RJB6 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TRDMT1O14717 391 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MGEA5O60502 916 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MAPTP10636 758 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ZNF26P17031 533 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 NCF2P19878 526 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ELK3P41970 407 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 SLC1A6P48664 564 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 IDH3AP50213 366 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MCCD1P59942 119 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L24Q0WX57 530 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MAMLD1Q13495 774 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PHKG1Q16816 387 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 C1orf220Q5T0J3 134 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 C6orf183Q5T699 404 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CES4AQ5XG92 561 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 C16orf46Q6P387 395 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP17L6PQ6QN14 398 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 MFSD7Q6UXD7 560 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TPH2Q8IWU9 490 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PDPRQ8NCN5 879 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PDCD6IPQ8WUM4 868 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CRYGNQ8WXF5 182 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CPA5Q8WXQ8 436 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TAMM41Q96BW9 452 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ACCSQ96QU6 501 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PKP2Q99959 881 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PSD2Q9BQI7 771 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ANKRD60Q9BZ19 345 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 SLC13A1Q9BZW2 595 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 RPF2Q9H7B2 306 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ZNF395Q9H8N7 513 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CD209Q9NNX6 404 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ANLNQ9NQW6 1124 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TMEM9Q9P0T7 183 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TTLL3Q9Y4R7 772 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TAF1LQ8IZX4 1826 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 K7ENM7 598 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 GRK2P25098 689 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 GABRB2P47870 512 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 HNRNPFP52597 415 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 FAM98CQ17RN3 349 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TMEM214Q6NUQ4 689 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 EEPD1Q7L9B9 569 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 USP37Q86T82 979 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 SETD3Q86TU7 594 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CTAGE3PQ8IX95 158 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 IQCF2Q8IXL9 164 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 LILRA2Q8N149 483 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 UBR7Q8N806 425 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TMEM102Q8N9M5 508 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 KYQ8NBH2 561 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 BHLHE22Q8NFJ8 381 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 CTRCQ99895 268 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 FRMD8Q9BZ67 464 aaPredicted RBP6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PCIF1Q9H4Z3 704 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 TMEM8AQ9HCN3 771 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 VTA1Q9NP79 307 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 OLAHQ9NV23 265 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PARVAQ9NVD7 372 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 HSPBP1Q9NZL4 362 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 ERVK-11Q9UQG0 969 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 BCS1LQ9Y276 419 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 COQ4Q9Y3A0 265 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 PCDHB2Q9Y5E7 798 aa6.02□□□□□ -1.45
R3HDM1-202ENST00000409478 LOC100653049A0A140TA62 436 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 FAM155AB1AL88 458 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 PI4K2BG5E9Z4 385 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 H3BMQ9 156 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 CYB561D2O14569 222 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 RFPL1O75677 317 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 BCAS2O75934 225 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 KRT34O76011 436 aa6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 FOSP01100 380 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 TCF7P36402 384 aaPredicted RBP6.01□□□□□ -1.45
R3HDM1-202ENST00000409478 GCNT1Q02742 428 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms