RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ZNF516Q92618 1163 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 DNAJC1Q96KC8 554 aaKnown RBP15.99■□□□□ 0.15
LIMS2-205ENST00000409455 CATSPER2Q96P56 530 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 SIKE1Q9BRV8 207 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 HSFX1Q9UBD0 423 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 GTF2A2P52657 109 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 MRPS5P82675 430 aaKnown RBP15.99■□□□□ 0.15
LIMS2-205ENST00000409455 WDR75Q8IWA0 830 aaKnown RBP15.99■□□□□ 0.15
LIMS2-205ENST00000409455 FAM71DQ8N9W8 422 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 BRI3BPQ8WY22 251 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 APBB2Q92870 758 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 EBF4Q9BQW3 602 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 Q9H521 79 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 MROH8Q9H579 483 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 MAD1L1Q9Y6D9 718 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 TEX264Q9Y6I9 313 aa15.99■□□□□ 0.15
LIMS2-205ENST00000409455 PEX1O43933 1283 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 SNNO75324 88 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 FAM155BO75949 473 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 PDE5AO76074 875 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 SMIM18P0DKX4 95 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 RAG1P15918 1043 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 GARTP22102 1010 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 OGDHQ02218 1023 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 TAP1Q03518 808 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 TDRD10Q5VZ19 366 aaKnown RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 CES4AQ5XG92 561 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 FBXL19Q6PCT2 694 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 C1orf228Q6PIY5 440 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 POLNQ7Z5Q5 900 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 CEP170P1Q96L14 293 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 SUDS3Q9H7L9 328 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 NMRK2Q9NPI5 230 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 SOCS7O14512 581 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 CYB561D2O14569 222 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 VILLO15195 856 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 KLHL2O95198 593 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 UBA1P22314 1058 aaKnown RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 STX3Q13277 289 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 RALGPS1Q5JS13 557 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 RABGAP1LQ5R372 815 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 BBS12Q6ZW61 710 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 UNC45BQ8IWX7 931 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 HIPK4Q8NE63 616 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 CFAP36Q96G28 342 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 ZFRQ96KR1 1074 aaKnown RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 XAB2Q9HCS7 855 aaKnown RBP15.98■□□□□ 0.15
LIMS2-205ENST00000409455 THAP1Q9NVV9 213 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 CDH22Q9UJ99 828 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 ZNF180Q9UJW8 692 aa15.98■□□□□ 0.15
LIMS2-205ENST00000409455 C3orf70A6NLC5 250 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 CASQ2O14958 399 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 SUPT20HL2P0C7V6 817 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 TBXAS1P24557 533 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 TPP2P29144 1249 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 DPYSL3Q14195 570 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 SMTNL2Q2TAL5 461 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 CST9Q5W186 159 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 KLHDC10Q6PID8 442 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 NIPA2Q8N8Q9 360 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 GPRC5AQ8NFJ5 357 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 PPP1R14CQ8TAE6 165 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 TIMMDC1Q9NPL8 285 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 MKS1Q9NXB0 559 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 APOBEC2Q9Y235 224 aaKnown RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 DTNAQ9Y4J8 743 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 MCF2LO15068 1137 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 COQ9O75208 318 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 STK10O94804 968 aaKnown RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 ATG7O95352 703 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 PROCP04070 461 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 KRT7P08729 469 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 FDFT1P37268 417 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 PRKCEQ02156 737 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 CYLC2Q14093 348 aaPredicted RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 LY6KQ17RY6 165 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 ARCQ7LC44 396 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 TMC7Q7Z402 723 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 MARVELD2Q8N4S9 558 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 CCDC33Q8N5R6 958 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 POU5F2Q8N7G0 328 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 ACTRT2Q8TDY3 377 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 IRGQQ8WZA9 623 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 GCNAQ96QF7 691 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 C20orf27Q9GZN8 174 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 STN1Q9H668 368 aaKnown RBP15.97■□□□□ 0.15
LIMS2-205ENST00000409455 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 USP29Q9HBJ7 922 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 ITGA11Q9UKX5 1188 aa15.97■□□□□ 0.15
LIMS2-205ENST00000409455 SF3B1O75533 1304 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIMS2-205ENST00000409455 BIRC5O15392 142 aa15.96■□□□□ 0.15
LIMS2-205ENST00000409455 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIMS2-205ENST00000409455 FARP2O94887 1054 aaPredicted RBP15.96■□□□□ 0.15
LIMS2-205ENST00000409455 BPGMP07738 259 aa15.96■□□□□ 0.15
LIMS2-205ENST00000409455 TGFB3P10600 412 aa15.96■□□□□ 0.15
LIMS2-205ENST00000409455 SOX10P56693 466 aa15.96■□□□□ 0.15
LIMS2-205ENST00000409455 EIF3EP60228 445 aaKnown RBP15.96■□□□□ 0.15
LIMS2-205ENST00000409455 CLDN10P78369 228 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms