RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SNRNP25Q9BV90 132 aaKnown RBP17.53■□□□□ 0.4
SSB-202ENST00000409333 LRRC3Q9BY71 257 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 L2HGDHQ9H9P8 463 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 TMPRSS4Q9NRS4 437 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 GPATCH2LQ9NWQ4 482 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.53■□□□□ 0.4
SSB-202ENST00000409333 TRPM5Q9NZQ8 1165 aa17.53■□□□□ 0.4
SSB-202ENST00000409333 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 IRAK2O43187 625 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 CEP104O60308 925 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 TLR5O60602 858 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 EFEMP1Q12805 493 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 EIF4EBP2Q13542 120 aaPredicted RBP17.52■□□□□ 0.4
SSB-202ENST00000409333 C10orf120Q5SQS8 335 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 VN1R2Q8NFZ6 395 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 RAPGEF5Q92565 580 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 DOCK4Q8N1I0 1966 aa17.52■□□□□ 0.4
SSB-202ENST00000409333 PDE2AO00408 941 aaPredicted RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 CES2O00748 559 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 F11P03951 625 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 GBP1P32455 592 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 LLGL1Q15334 1064 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 CA9Q16790 459 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 ZC3H12AQ5D1E8 599 aaKnown RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 RTL10Q7L3V2 364 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 ANKS1BQ7Z6G8 1248 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 EXD1Q8NHP7 514 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 HDAC7Q8WUI4 952 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 CORO1BQ9BR76 489 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 MAGEB5Q9BZ81 275 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 ANLNQ9NQW6 1124 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 OLA1Q9NTK5 396 aaKnown RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSB-202ENST00000409333 DDX56Q9NY93 547 aaKnown RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 A0A1W2PPC1 479 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 LRRD1A4D1F6 860 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 I6L893 689 aaPredicted RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 NRG2O14511 850 aaPredicted RBP17.51■□□□□ 0.39
SSB-202ENST00000409333 F9P00740 461 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 CD48P09326 243 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 GABRR2P28476 465 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 HOXA9P31269 272 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 CXCR3P49682 368 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 ERMARDQ5T6L9 678 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 SEL1L2Q5TEA6 688 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 GAREM2Q75VX8 874 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 CCDC50Q8IVM0 306 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 TEKT4Q8WW24 435 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 SERPINB11Q96P15 392 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 RASAL2Q9UJF2 1139 aa17.51■□□□□ 0.39
SSB-202ENST00000409333 C2orf78A6NCI8 922 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 C3orf70A6NLC5 250 aaPredicted RBP17.5■□□□□ 0.39
SSB-202ENST00000409333 SPDYE4A6NLX3 237 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 ZRANB2O95218 330 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSB-202ENST00000409333 PPP3CCP48454 512 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 TUBB2AQ13885 445 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 KCNC3Q14003 757 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 WHAMMP3Q1A5X7 153 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 BOLA3Q53S33 107 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 HECTD3Q5T447 861 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 MFSD7Q6UXD7 560 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 SND1Q7KZF4 910 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSB-202ENST00000409333 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 RASGEF1CQ8N431 466 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 CMASQ8NFW8 434 aaPredicted RBP17.5■□□□□ 0.39
SSB-202ENST00000409333 TUBB2BQ9BVA1 445 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 TTYH1Q9H313 450 aaPredicted RBP17.5■□□□□ 0.39
SSB-202ENST00000409333 IGFLR1Q9H665 355 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 ASAH2Q9NR71 780 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 MARCH2Q9P0N8 246 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 FZD10Q9ULW2 581 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 AP4E1Q9UPM8 1137 aa17.5■□□□□ 0.39
SSB-202ENST00000409333 NUP210Q8TEM1 1887 aaPredicted RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 COCHO43405 550 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 OAS1P00973 400 aaKnown RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 HNRNPA1P09651 372 aaKnown RBP eCLIP17.49■□□□□ 0.39
SSB-202ENST00000409333 KDELR1P24390 212 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 CYP4F8P98187 520 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 CCDC181Q5TID7 509 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 RCOR2Q8IZ40 523 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 ZNF276Q8N554 614 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 RBM41Q96IZ5 413 aaKnown RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 CDK5RAP1Q96SZ6 601 aaKnown RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 HERPUD2Q9BSE4 406 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 TKTL2Q9H0I9 626 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 PRDM12Q9H4Q4 367 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 NSUN3Q9H649 340 aaKnown RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 ZDHHC7Q9NXF8 308 aa17.49■□□□□ 0.39
SSB-202ENST00000409333 DNMT3BQ9UBC3 853 aaKnown RBP17.49■□□□□ 0.39
SSB-202ENST00000409333 CCDC195A0A1B0GUA6 201 aa17.48■□□□□ 0.39
SSB-202ENST00000409333 FGGP02679 453 aa17.48■□□□□ 0.39
SSB-202ENST00000409333 MYL4P12829 197 aa17.48■□□□□ 0.39
SSB-202ENST00000409333 GJA1P17302 382 aa17.48■□□□□ 0.39
SSB-202ENST00000409333 ATP5C1P36542 298 aaKnown RBP17.48■□□□□ 0.39
SSB-202ENST00000409333 CCR2P41597 374 aa17.48■□□□□ 0.39
SSB-202ENST00000409333 TUBP50607 506 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms