RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 BHLHA9Q7RTU4 235 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 WDTC1Q8N5D0 677 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 PCDHB18PQ96TA0 734 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.74■■□□□ 1.07
C4orf48-201ENST00000409248 KLF16Q9BXK1 252 aaPredicted RBP21.74■■□□□ 1.07
C4orf48-201ENST00000409248 DEF6Q9H4E7 631 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 ARHGAP20Q9P2F6 1191 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 RASAL2Q9UJF2 1139 aa21.74■■□□□ 1.07
C4orf48-201ENST00000409248 ARIH1Q9Y4X5 557 aaPredicted RBP21.74■■□□□ 1.07
C4orf48-201ENST00000409248 SSU72P8A0A1W2PR75 194 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 SHISA7A6NL88 538 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 DCNP07585 359 aaKnown RBP21.73■■□□□ 1.07
C4orf48-201ENST00000409248 PLEKP08567 350 aaPredicted RBP21.73■■□□□ 1.07
C4orf48-201ENST00000409248 PPP1R2P3Q6NXS1 205 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 MIB1Q86YT6 1006 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 RNF139Q8WU17 664 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 PPP1R13BQ96KQ4 1090 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 TRIM62Q9BVG3 475 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 SLC4A5Q9BY07 1137 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 SYNCQ9H7C4 482 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 ABCC13Q9NSE7 274 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 MARCH2Q9P0N8 246 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 CYTH4Q9UIA0 394 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 NUDT5Q9UKK9 219 aa21.73■■□□□ 1.07
C4orf48-201ENST00000409248 YJEFN3A6XGL0 299 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 E7ENQ6 273 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 PIK3R2O00459 728 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 MDM4O15151 490 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 GALR2O43603 387 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 ADH1CP00326 375 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 EIF4A3P38919 411 aaKnown RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 NSFP46459 744 aaKnown RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 RPS9P46781 194 aaKnown RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 RPL34P49207 117 aaKnown RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 COG7P83436 770 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 EFEMP1Q12805 493 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 MAPK8IP2Q13387 824 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 LRRC32Q14392 662 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 BSPRYQ5W0U4 402 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 DTWD2Q8NBA8 298 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 CPA5Q8WXQ8 436 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 MIS12Q9H081 205 aa21.72■■□□□ 1.07
C4orf48-201ENST00000409248 MTF2Q9Y483 593 aaPredicted RBP21.72■■□□□ 1.07
C4orf48-201ENST00000409248 OTOL1A6NHN0 477 aaPredicted RBP21.71■■□□□ 1.07
C4orf48-201ENST00000409248 DDX3XO00571 662 aaKnown RBP eCLIP21.71■■□□□ 1.072e-9■■■■■ 68
C4orf48-201ENST00000409248 SCAMP3O14828 347 aaKnown RBP21.71■■□□□ 1.07
C4orf48-201ENST00000409248 LTFP02788 710 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 UNGP13051 313 aaPredicted RBP21.71■■□□□ 1.07
C4orf48-201ENST00000409248 GJA4P35212 333 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 CENPCQ03188 943 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 TXNDC11Q6PKC3 985 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 TMEM110Q86TL2 294 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 ERICH1Q86X53 443 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 OLIG1Q8TAK6 271 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 NDRG1Q92597 394 aaKnown RBP21.71■■□□□ 1.07
C4orf48-201ENST00000409248 CLDN23Q96B33 292 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 CCDC42Q96M95 316 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 CPXM1Q96SM3 734 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 IER2Q9BTL4 223 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 LINC00597Q9H2U6 94 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 DLGAP2Q9P1A6 1054 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 ADAMTS1Q9UHI8 967 aa21.71■■□□□ 1.07
C4orf48-201ENST00000409248 E5RJQ4 531 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 AKR1B10O60218 316 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 GABBR2O75899 941 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 CYP17A1P05093 508 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 PTPN5P54829 565 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 PON2Q15165 354 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 PTPN20Q4JDL3 420 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 DGKKQ5KSL6 1271 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 HTR3DQ70Z44 454 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 BBS7Q8IWZ6 715 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 ZNF687Q8N1G0 1237 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 CHP1Q99653 195 aa21.7■■□□□ 1.06
C4orf48-201ENST00000409248 NHEJ1Q9H9Q4 299 aaPredicted RBP21.7■■□□□ 1.06
C4orf48-201ENST00000409248 STC2O76061 302 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 GZMAP12544 262 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 FECHP22830 423 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 GRSF1Q12849 480 aaKnown RBP eCLIP21.69■■□□□ 1.06
C4orf48-201ENST00000409248 DHCR24Q15392 516 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 ACAD10Q6JQN1 1059 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 MSANTD2Q6P1R3 559 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 PHF13Q86YI8 300 aaPredicted RBP21.69■■□□□ 1.06
C4orf48-201ENST00000409248 TMTC1Q8IUR5 882 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 SLC30A5Q8TAD4 765 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 CLEC4CQ8WTT0 213 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 EDEM1Q92611 657 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 FAM149B1Q96BN6 582 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 PLD4Q96BZ4 506 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 DCLK3Q9C098 648 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 IRF2BPLQ9H1B7 796 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 RAPGEFL1Q9UHV5 662 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 ZNF510Q9Y2H8 683 aa21.69■■□□□ 1.06
C4orf48-201ENST00000409248 SLC12A8A0AV02 714 aa21.68■■□□□ 1.06
C4orf48-201ENST00000409248 FAM170AA1A519 330 aa21.68■■□□□ 1.06
C4orf48-201ENST00000409248 TRDMT1O14717 391 aaKnown RBP21.68■■□□□ 1.06
C4orf48-201ENST00000409248 ERBB2P04626 1255 aa21.68■■□□□ 1.06
C4orf48-201ENST00000409248 CALB1P05937 261 aa21.68■■□□□ 1.06
C4orf48-201ENST00000409248 ADH5P11766 374 aa21.68■■□□□ 1.06
C4orf48-201ENST00000409248 MMP8P22894 467 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms