RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 OXER1Q8TDS5 423 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 TRIM39Q9HCM9 518 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 PIN4Q9Y237 131 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 LRRC7Q96NW7 1537 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SKIV2L2P42285 1042 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 FXR2P51116 673 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■□□□ 11.8
SHANK2-203ENST00000409161 ARHGDIBP52566 201 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 CSNK2BP67870 215 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 VPS72Q15906 364 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 BICRALQ6AI39 1079 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 MYDGFQ969H8 173 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 UBP1Q9NZI7 540 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 PLAGL2Q9UPG8 496 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 ABLIM1O14639 778 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 LIN7AO14910 233 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 CLOCKO15516 846 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 ODC1P11926 461 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 QRICH1Q2TAL8 776 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 CD302Q8IX05 232 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 UTP15Q8TED0 518 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 KCNB2Q92953 911 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 GGA2Q9UJY4 613 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 GSAPA4D1B5 854 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 KCNQ3O43525 872 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 RASA1P20936 1047 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SCARA3Q6AZY7 606 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 COMMD3-BMI1R4GMX3 469 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SETBP1Q9Y6X0 1596 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 ZNF335Q9H4Z2 1342 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 THOC7Q6I9Y2 204 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 YTHDF3Q7Z739 585 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 OR2W6PQ8NHA6 318 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 EPS8L3Q8TE67 593 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 MYLPFQ96A32 169 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 HPDLQ96IR7 371 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 FUT8Q9BYC5 575 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 CELF4Q9BZC1 486 aaKnown RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 CCDC189A1A4V9 331 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 SAGE2PA6NJ88 616 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 NCAM1P13591 858 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 HOXB8P17481 243 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 MASTLQ96GX5 879 aa12.47□□□□□ -0.41
SHANK2-203ENST00000409161 MAGEB10Q96LZ2 347 aaPredicted RBP12.47□□□□□ -0.41
SHANK2-203ENST00000409161 POU1F1P28069 291 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 STARP49675 285 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 NOA1Q8NC60 698 aaKnown RBP12.46□□□□□ -0.41
SHANK2-203ENST00000409161 ORAI2Q96SN7 254 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 PAFAH2Q99487 392 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 KCNH4Q9UQ05 1017 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 LINC00854A0A1B0GVQ3 168 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SSNA1O43805 119 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 PRKAR1AP10644 381 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 TCF4P15884 667 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SLC1A6P48664 564 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SMTNL2Q2TAL5 461 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 PRRG1O14668 218 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SERPINE1P05121 402 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 ALDH1A3P47895 512 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 CDH18Q13634 790 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SMAD1Q15797 465 aaKnown RBP12.46□□□□□ -0.41
SHANK2-203ENST00000409161 GRTP1Q5TC63 336 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.46□□□□□ -0.41
SHANK2-203ENST00000409161 VPS51Q9UID3 782 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 IRAK3Q9Y616 596 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 IDH3BO43837 385 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 MGRN1O60291 552 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 FSBPO95073 299 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 PIK3C3Q8NEB9 887 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 RIN2Q8WYP3 895 aaPredicted RBP12.46□□□□□ -0.41
SHANK2-203ENST00000409161 CYLDQ9NQC7 956 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 VANGL2Q9ULK5 521 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 ACOT9Q9Y305 439 aa12.46□□□□□ -0.41
SHANK2-203ENST00000409161 INO80Q9ULG1 1556 aaPredicted RBP12.46□□□□□ -0.42
SHANK2-203ENST00000409161 ZW10O43264 779 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 RPN2P04844 631 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 S100A1P23297 94 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 SLC11A2P49281 568 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 CHN2P52757 468 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 NAA30Q147X3 362 aaPredicted RBP12.46□□□□□ -0.42
SHANK2-203ENST00000409161 BROXQ5VW32 411 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 PJA1Q8NG27 643 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 STK32AQ8WU08 396 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 UBOX5O94941 541 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 FBXO21O94952 628 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 ME2P23368 584 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 PTGES3Q15185 160 aaKnown RBP12.46□□□□□ -0.42
SHANK2-203ENST00000409161 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.42
SHANK2-203ENST00000409161 KLHDC7AQ5VTJ3 777 aa12.46□□□□□ -0.42
SHANK2-203ENST00000409161 FAM228AQ86W67 206 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms