RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 TTC39BQ5VTQ0 682 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DEFB106AQ8N104 65 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 VPS37AQ8NEZ2 397 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PAWRQ96IZ0 340 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 NR1H4Q96RI1 486 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 MCCC1Q96RQ3 725 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TKTL2Q9H0I9 626 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 POLMQ9NP87 494 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DUS2Q9NX74 493 aaKnown RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 INSL6Q9Y581 213 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PRMT3O60678 531 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 MAPK1P28482 360 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 PTENP60484 403 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 LRRC74AQ0VAA2 488 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ITGA9Q13797 1035 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF268Q14587 947 aaPredicted RBP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 INSCQ1MX18 579 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SV2AQ7L0J3 742 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 SYTL1Q8IYJ3 562 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 TAGAPQ8N103 731 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 C10orf53Q8N6V4 93 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CXorf40BQ96DE9 158 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 VPS50Q96JG6 964 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 BTBD6Q96KE9 485 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CCDC138Q96M89 665 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 EXO5Q9H790 373 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 LRRC40Q9H9A6 602 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 WDR41Q9HAD4 459 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 RBM22Q9NW64 420 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN3A-203ENST00000409101 INTUQ9ULD6 942 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 VANGL2Q9ULK5 521 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 CHMP2BQ9UQN3 213 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 DTNAQ9Y4J8 743 aa5.17□□□□□ -1.58
SCN3A-203ENST00000409101 ABHD14A-ACY1A0A1B0GW23 586 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ANGPT2O15123 496 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GRM6O15303 877 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 STAU1O95793 577 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 STIP1P31948 543 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 RFX3P48380 749 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SULT2A1Q06520 285 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TARBP2Q15633 366 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 RAP1GAP2Q684P5 730 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 RAET1GQ6H3X3 334 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SUGP1Q8IWZ8 645 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 AGR3Q8TD06 166 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TATDN2Q93075 761 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 OTULINQ96BN8 352 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SCLYQ96I15 445 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 FRMD8Q9BZ67 464 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 PITPNM3Q9BZ71 974 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 UNC93B1Q9H1C4 597 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SMYD3Q9H7B4 428 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NDE1Q9NXR1 346 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CASZ1Q86V15 1759 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 FGF10O15520 208 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 DCTN3O75935 186 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 JCHAINP01591 159 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MLNP12872 115 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NPR3P17342 541 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MAPK8P45983 427 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SLC12A3P55017 1021 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ERVK-21P61565 698 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GRIN1Q05586 938 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 DDR2Q16832 855 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 KCNT1Q5JUK3 1230 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ILDR2Q71H61 639 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GLT6D1Q7Z4J2 308 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SLC47A2Q86VL8 602 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 PDCD7Q8N8D1 485 aaKnown RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 FLCNQ8NFG4 579 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 IL31RAQ8NI17 732 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ADAM32Q8TC27 787 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 JADE3Q92613 823 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MED8Q96G25 268 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 THAP2Q9H0W7 228 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 SEPT3Q9UH03 358 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZNHIT2Q9UHR6 403 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CYP3A7-CYP3A51PA0A087WV96 503 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 E2F8A0AVK6 867 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NCF1BA6NI72 391 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NCF1CA8MVU1 366 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZSCAN9O15535 394 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 OPHN1O60890 802 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 BMP10O95393 424 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NCF1P14598 390 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CYP3A7P24462 503 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CHI3L1P36222 383 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 GPR1P46091 355 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZNF135P52742 658 aaPredicted RBP5.16□□□□□ -1.58
SCN3A-203ENST00000409101 FAM83EQ2M2I3 478 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 POM121L1PQ3SYA9 428 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TIGD5Q53EQ6 642 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 TMCO4Q5TGY1 634 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 HDDC3Q8N4P3 179 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 NAT16Q8N8M0 369 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MAGEC3Q8TD91 643 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 MCRS1Q96EZ8 462 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 CDT1Q9H211 546 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 RUBCNLQ9H714 662 aa5.16□□□□□ -1.58
SCN3A-203ENST00000409101 ZCCHC17Q9NP64 241 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms