RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 CAVIN2O95810 425 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 ZBED1O96006 694 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 VDRP11473 427 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 CORO1AP31146 461 aaKnown RBP23.59■■□□□ 1.37
KDELR3-202ENST00000409006 P2RY2P41231 377 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 BCAT1P54687 386 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 STX17P56962 302 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 PREPLQ4J6C6 727 aaPredicted RBP23.59■■□□□ 1.37
KDELR3-202ENST00000409006 CDK5RAP1Q96SZ6 601 aaKnown RBP23.59■■□□□ 1.37
KDELR3-202ENST00000409006 MARCH2Q9P0N8 246 aa23.59■■□□□ 1.37
KDELR3-202ENST00000409006 BCCIPQ9P287 314 aaKnown RBP eCLIP23.59■■□□□ 1.37
KDELR3-202ENST00000409006 CIZ1Q9ULV3 898 aaPredicted RBP23.59■■□□□ 1.37
KDELR3-202ENST00000409006 A0A1W2PQF6 199 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 TM4SF5O14894 197 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 PMM2O15305 246 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 GABBR2O75899 941 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 TBXAS1P24557 533 aaPredicted RBP23.58■■□□□ 1.37
KDELR3-202ENST00000409006 NTSR1P30989 418 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 DGKGP49619 791 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 LIMK1P53667 647 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 SLC8A3P57103 927 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 YWHAEP62258 255 aaKnown RBP23.58■■□□□ 1.37
KDELR3-202ENST00000409006 COG7P83436 770 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 ADIGQ0VDE8 80 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 BST2Q10589 180 aaKnown RBP23.58■■□□□ 1.37
KDELR3-202ENST00000409006 MAP7D1Q3KQU3 841 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 PKDCCQ504Y2 493 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 FYB2Q5VWT5 728 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 TMEM270Q6UE05 265 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 RSRC2Q7L4I2 434 aaKnown RBP23.58■■□□□ 1.37
KDELR3-202ENST00000409006 PGBD3Q8N328 593 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 ARHGAP18Q8N392 663 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 NT5C1BQ96P26 610 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 CD248Q9HCU0 757 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 FBXO10Q9UK96 956 aa23.58■■□□□ 1.37
KDELR3-202ENST00000409006 AGO1Q9UL18 857 aaKnown RBP23.58■■□□□ 1.37
KDELR3-202ENST00000409006 ADAMTS9Q9P2N4 1935 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 SLC12A8A0AV02 714 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 HOXB2P14652 356 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 GABRG2P18507 467 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 PPP1R2P41236 205 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 PPM1JQ5JR12 505 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 STPG1Q5TH74 334 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 KIAA1211LQ6NV74 962 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 NUDT18Q6ZVK8 323 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 TRMT11Q7Z4G4 463 aaKnown RBP23.57■■□□□ 1.36
KDELR3-202ENST00000409006 C11orf74Q86VG3 221 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 DENND1CQ8IV53 801 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 ARHGEF19Q8IW93 802 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 LRRC4Q9HBW1 653 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 HESX1Q9UBX0 185 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 CLEC4EQ9ULY5 219 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 PCDHB4Q9Y5E5 795 aa23.57■■□□□ 1.36
KDELR3-202ENST00000409006 CNOT1A5YKK6 2376 aaKnown RBP23.57■■□□□ 1.36
KDELR3-202ENST00000409006 LAMA1P25391 3075 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 YJEFN3A6XGL0 299 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 PATE3B3GLJ2 98 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 E7ENQ6 273 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 PENKP01210 267 aaPredicted RBP23.56■■□□□ 1.36
KDELR3-202ENST00000409006 DHPSP49366 369 aaPredicted RBP23.56■■□□□ 1.36
KDELR3-202ENST00000409006 RRAGAQ7L523 313 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 TMEFF1Q8IYR6 380 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 PPM1KQ8N3J5 372 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 EDEM1Q92611 657 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 SFMBT1Q9UHJ3 866 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 ZNF510Q9Y2H8 683 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 RAD54BQ9Y620 910 aa23.56■■□□□ 1.36
KDELR3-202ENST00000409006 WASH3PC4AMC7 463 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 PIK3R2O00459 728 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 RGS7P49802 495 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 BSPRYQ5W0U4 402 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 FOXR2Q6PJQ5 311 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 LCLAT1Q6UWP7 414 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 ARMCX6Q7L4S7 300 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 TRIM59Q8IWR1 403 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 CHPFQ8IZ52 775 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 KCTD13Q8WZ19 329 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 DCLK3Q9C098 648 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 CACNA2D2Q9NY47 1150 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 KIAA1257Q9ULG3 409 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 STRIP2Q9ULQ0 834 aa23.55■■□□□ 1.36
KDELR3-202ENST00000409006 BICDL2A1A5D9 508 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 PAEPP09466 180 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 LCP1P13796 627 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 BRD2P25440 801 aaKnown RBP23.54■■□□□ 1.36
KDELR3-202ENST00000409006 CHKAP35790 457 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 PTGER3P43115 390 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 MFAP3P55082 362 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 KCNH2Q12809 1159 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 GEN1Q17RS7 908 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 IL31Q6EBC2 164 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 PMF1Q6P1K2 205 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 CYP2U1Q7Z449 544 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 FMNL3Q8IVF7 1028 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 EHBP1Q8NDI1 1231 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 IPO4Q8TEX9 1081 aaKnown RBP23.54■■□□□ 1.36
KDELR3-202ENST00000409006 SLC35F5Q8WV83 523 aa23.54■■□□□ 1.36
KDELR3-202ENST00000409006 IPO9Q96P70 1041 aaKnown RBP23.54■■□□□ 1.36
KDELR3-202ENST00000409006 GABRG3Q99928 467 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms