RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ITGB3P05106 788 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 FAM153BP0C7A2 387 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 TPP2P29144 1249 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 AVPR1AP37288 418 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 IFI35P80217 286 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 MSLNQ13421 630 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 FAM153CQ494X1 144 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 MFSD14CQ5VZR4 134 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ZNF720Q7Z2F6 126 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 NT5DC3Q86UY8 548 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CBWD2Q8IUF1 395 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 ABRAQ8N0Z2 381 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 TRPC4APQ8TEL6 797 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 FAM172AQ8WUF8 416 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 CPNE1Q99829 537 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 DCUN1D5Q9BTE7 237 aa13.32□□□□□ -0.28
RNF43-201ENST00000407977 SPRTNQ9H040 489 aaPredicted RBP13.32□□□□□ -0.28
RNF43-201ENST00000407977 ATXN2Q99700 1313 aaKnown RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 RRN3P2A6NIE6 340 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 LRRC10BA6NIK2 292 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MRASO14807 208 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MED24O75448 989 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 SMNDC1O75940 238 aaKnown RBP eCLIP13.31□□□□□ -0.285e-6■□□□□ 10.8
RNF43-201ENST00000407977 AKAP3O75969 853 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 CRTAMO95727 393 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ZNF682O95780 498 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 GLRBP48167 497 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ZNF662Q6ZS27 426 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 CHST13Q8NET6 341 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ENKURQ8TC29 256 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 DEPDC7Q96QD5 511 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MCM8Q9UJA3 840 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 PCDHGC5Q9Y5F6 944 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 FAM220BPB1ANY3 271 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TADA2AO75478 443 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MFN2O95140 757 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ATG7O95352 703 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TSHRP16473 764 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 RPL5P46777 297 aaKnown RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 CASP4P49662 377 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 BCAT1P54687 386 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 RGS21Q2M5E4 152 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 SPANXN3Q5MJ09 141 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ERMARDQ5T6L9 678 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 SLITRK1Q96PX8 696 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 PRDM16Q9HAZ2 1276 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TRPC7Q9HCX4 862 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TBC1D13Q9NVG8 400 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ANXA6P08133 673 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 PGAM1P18669 254 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MZF1P28698 734 aaPredicted RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 SREBF1P36956 1147 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 ELK3P41970 407 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 PSMC6P62333 389 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 FASTKQ14296 549 aaKnown RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 USP39Q53GS9 565 aaKnown RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 MCOLN2Q8IZK6 566 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 CCDC33Q8N5R6 958 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 CCDC28BQ9BUN5 200 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 CYLDQ9NQC7 956 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 MBD2Q9UBB5 411 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 VANGL2Q9ULK5 521 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 AP4E1Q9UPM8 1137 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 POLR1AO95602 1720 aaPredicted RBP13.31□□□□□ -0.28
RNF43-201ENST00000407977 LINC00854A0A1B0GVQ3 168 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 HMGCS2P54868 508 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 RIPOR1Q6ZS17 1223 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 TSHZ1Q6ZSZ6 1077 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 AGAP11Q8TF27 550 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 LRMDAQ9H2I8 198 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 PLGRKTQ9HBL7 147 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 AFF2P51816 1311 aa13.31□□□□□ -0.28
RNF43-201ENST00000407977 SNPHO15079 494 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 CBX6O95503 412 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 YY1P25490 414 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 CHI3L1P36222 383 aaPredicted RBP13.3□□□□□ -0.28
RNF43-201ENST00000407977 CD151P48509 253 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 SLC16A1P53985 500 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 XIAPP98170 497 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 MTMR2Q13614 643 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 Q4G0T1 1027 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 MARK2Q7KZI7 788 aaKnown RBP13.3□□□□□ -0.28
RNF43-201ENST00000407977 WDR49Q8IV35 697 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 BLOC1S5Q8TDH9 187 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 PRCCQ92733 491 aaPredicted RBP13.3□□□□□ -0.28
RNF43-201ENST00000407977 MCRS1Q96EZ8 462 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 ZNF512Q96ME7 567 aaPredicted RBP13.3□□□□□ -0.28
RNF43-201ENST00000407977 DPP3Q9NY33 737 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 INPP4BO15327 924 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 SLC25A27O95847 323 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 KRT6AP02538 564 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 ABCB1P08183 1280 aaPredicted RBP13.3□□□□□ -0.28
RNF43-201ENST00000407977 HSMCR30P0CW71 290 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 NR2C2P49116 596 aa13.3□□□□□ -0.28
RNF43-201ENST00000407977 NPY2RP49146 381 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms