RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CMASQ8NFW8 434 aaPredicted RBP3.86□□□□□ -1.79
RTN4-208ENST00000404909 SP7Q8TDD2 431 aaPredicted RBP3.86□□□□□ -1.79
RTN4-208ENST00000404909 IFT81Q8WYA0 676 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 CASP10Q92851 521 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 NT5C3BQ969T7 300 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 NCAPGQ9BPX3 1015 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 NACA2Q9H009 215 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 TKTL2Q9H0I9 626 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 SIK2Q9H0K1 926 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.86□□□□□ -1.791e-7■■□□□ 12.1
RTN4-208ENST00000404909 YIPF1Q9Y548 306 aa3.86□□□□□ -1.79
RTN4-208ENST00000404909 PRRC2BQ5JSZ5 2229 aaKnown RBP3.86□□□□□ -1.79
RTN4-208ENST00000404909 TRANK1O15050 2925 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 C3orf70A6NLC5 250 aaPredicted RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 TGM5O43548 720 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 LPXNO60711 386 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PHF2O75151 1096 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 HEXIM1O94992 359 aaKnown RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 ADH1AP07327 375 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 HMBSP08397 361 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 RARGP13631 454 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 DNAJB1P25685 340 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 GBP1P32455 592 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 COPS2P61201 443 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 DR1Q01658 176 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PLD1Q13393 1074 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 DPYSL3Q14195 570 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 VEPH1Q14D04 833 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 ARL13BQ3SXY8 428 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 EFHC2Q5JST6 749 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 C1orf228Q6PIY5 440 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 B4GALNT4Q76KP1 1039 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 MAATS1Q7Z4T9 603 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TNS4Q8IZW8 715 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CCDC33Q8N5R6 958 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CCDC26Q8TAB7 109 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 MAIP1Q8WWC4 291 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SPATA17Q96L03 361 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CCSER2Q9H7U1 834 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PCDH18Q9HCL0 1135 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TLR9Q9NR96 1032 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TLR8Q9NR97 1041 aaKnown RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 STIM2Q9P246 746 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 HEY1Q9Y5J3 304 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SPTBN5Q9NRC6 3674 aaKnown RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 SPDYE4A6NLX3 237 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 GRM6O15303 877 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 DAPK3O43293 454 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 LILRB3O75022 631 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 F9P00740 461 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SRGAP2BP0DMP2 458 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 GOT1P17174 413 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 L1CAMP32004 1257 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 ADRA1BP35368 520 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 IRS1P35568 1242 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 ARL4AP40617 200 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 EPHB3P54753 998 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 VSNL1P62760 191 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 KLF1Q13351 362 aaPredicted RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 PDK2Q15119 407 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PPP1R7Q15435 360 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SIX1Q15475 284 aaPredicted RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 TRADDQ15628 312 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TRIP13Q15645 432 aaPredicted RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 ANKRD20A8PQ5CZ79 823 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TTC27Q6P3X3 843 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 GSTA5Q7RTV2 222 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 RBM23Q86U06 439 aaKnown RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 ARHGAP18Q8N392 663 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SPPL3Q8TCT6 385 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TEKT4Q8WW24 435 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 KCTD15Q96SI1 283 aaPredicted RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 TRIM51Q9BSJ1 452 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 EMILIN2Q9BXX0 1053 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 C10orf88Q9H8K7 445 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 EPB41L5Q9HCM4 733 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 WDR6Q9NNW5 1121 aaKnown RBP3.85□□□□□ -1.79
RTN4-208ENST00000404909 ANLNQ9NQW6 1124 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 RRN3Q9NYV6 651 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 STK39Q9UEW8 545 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 RASAL2Q9UJF2 1139 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 FZD10Q9ULW2 581 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 ZNF148Q9UQR1 794 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SSX2IPQ9Y2D8 614 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 INSL5Q9Y5Q6 135 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 SNX10Q9Y5X0 201 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PTPRDP23468 1912 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PTPRSQ13332 1948 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 NLRC5Q86WI3 1866 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 EYSQ5T1H1 3165 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 C2orf71A6NGG8 1288 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 PER2O15055 1255 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 TLR5O60602 858 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 GLUD1P00367 558 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 LRG1P02750 347 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CSH1P0DML2 217 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CSH2P0DML3 217 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 IL4RP24394 825 aa3.85□□□□□ -1.79
RTN4-208ENST00000404909 CHRNA3P32297 505 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms