RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AMPD1P23109 780 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 ATP5OP48047 213 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 TMPRSS15P98073 1019 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 TRMT5Q32P41 509 aaKnown RBP20.54■□□□□ 0.88
CCDC47-202ENST00000403162 MTBPQ96DY7 904 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 FAM161BQ96MY7 647 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 KATNBL1Q9H079 304 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 SDCBP2Q9H190 292 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 KRT82Q9NSB4 513 aa20.54■□□□□ 0.88
CCDC47-202ENST00000403162 ZC3H7BQ9UGR2 993 aaKnown RBP20.54■□□□□ 0.88
CCDC47-202ENST00000403162 CXorf49A8MYA2 514 aaPredicted RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 FARP2O94887 1054 aaPredicted RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ENO1P06733 434 aaKnown RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 PROZP22891 400 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 IER5Q5VY09 327 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 RBM15BQ8NDT2 890 aaKnown RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 GATA6Q92908 595 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 LRRC39Q96DD0 335 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 CNPY3Q9BT09 278 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ABHD16BQ9H3Z7 469 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 PLAC1Q9HBJ0 212 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 PPARGC1AQ9UBK2 798 aaKnown RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 TAGLN3Q9UI15 199 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 GABRQQ9UN88 632 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 THSD7BQ9C0I4 1608 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 MAGEA13PA6NCF6 341 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 TM7SF2O76062 418 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 MICAL2O94851 1124 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 PTPN11Q06124 597 aaPredicted RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 GSTA3Q16772 222 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 DNAL1Q4LDG9 190 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ZNF667Q5HYK9 610 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 SYCP2LQ5T4T6 812 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 FAM160B1Q5W0V3 765 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 CES4AQ5XG92 561 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 SLC30A9Q6PML9 568 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 MPZL3Q6UWV2 235 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 METTL7BQ6UX53 244 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 CAND1Q86VP6 1230 aaKnown RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ARID3BQ8IVW6 561 aaPredicted RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ZBTB8OSQ8IWT0 167 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 SCUBE1Q8IWY4 988 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 COPS5Q92905 334 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 RNF157Q96PX1 679 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 ADPGKQ9BRR6 497 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 DDX43Q9NXZ2 648 aaKnown RBP20.53■□□□□ 0.88
CCDC47-202ENST00000403162 DNAJB4Q9UDY4 337 aa20.53■□□□□ 0.88
CCDC47-202ENST00000403162 MAP3K13O43283 966 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 SNNO75324 88 aaPredicted RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 ADCYAP1R1P41586 468 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CPA2P48052 419 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 STAT5BP51692 787 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CAP1Q01518 475 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 LAMTOR4Q0VGL1 99 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CHI3L2Q15782 390 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CELF3Q5SZQ8 465 aaKnown RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 FAM102AQ5T9C2 384 aaPredicted RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 OLFML2BQ68BL8 750 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 ACAP3Q96P50 834 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 WASF2Q9Y6W5 498 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 SPECC1L-ADORA2AF8WAN1 911 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 GPR25O00155 361 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 BIRC5O15392 142 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 KCNN4O15554 427 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 KRT38O76015 456 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 APOEP02649 317 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 GPD1P21695 349 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 FLT3LGP49771 235 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CDH8P55286 799 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 PRKCZQ05513 592 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 MXD4Q14582 209 aaPredicted RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 PRAMEF19Q5SWL8 479 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 TSHZ1Q6ZSZ6 1077 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CRLF3Q8IUI8 442 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 NUDCD3Q8IVD9 361 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 KBTBD2Q8IY47 623 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CD99L2Q8TCZ2 262 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.52■□□□□ 0.88
CCDC47-202ENST00000403162 CCDC106Q9BWC9 280 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 KLC2Q9H0B6 622 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 PTPRHQ9HD43 1115 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 SIX4Q9UIU6 781 aa20.52■□□□□ 0.88
CCDC47-202ENST00000403162 PCNTO95613 3336 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 RBM47A0AV96 593 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 CIB2O75838 187 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 TGM2P21980 687 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 GPD2P43304 727 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 PAPOLAP51003 745 aaKnown RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 C1QTNF8P60827 252 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 NBPF20Q3BBV1 942 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 THEMIS2Q5TEJ8 643 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 C6orf163Q5TEZ5 329 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 C1orf228Q6PIY5 440 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 MYLK4Q86YV6 388 aaPredicted RBP20.51■□□□□ 0.87
CCDC47-202ENST00000403162 PLD5Q8N7P1 536 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 MCUQ8NE86 351 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 FBXO27Q8NI29 283 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 TRAPPC9Q96Q05 1148 aa20.51■□□□□ 0.87
CCDC47-202ENST00000403162 TWNKQ96RR1 684 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms