RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 HMBSP08397 361 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 P4HA1P13674 534 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 IL12RB1P42701 662 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 GRIK2Q13002 908 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 GEN1Q17RS7 908 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 FUT11Q495W5 492 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 KMT5BQ4FZB7 885 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 C10orf120Q5SQS8 335 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 CEP135Q66GS9 1140 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 CACUL1Q86Y37 369 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 SLC9A9Q8IVB4 645 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 NAXDQ8IW45 347 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 PNPLA1Q8N8W4 532 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 CYFIP2Q96F07 1278 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 HNRNPABQ99729 332 aaKnown RBP12.55□□□□□ -0.4
LINC00544-201ENST00000400540 BACH2Q9BYV9 841 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 FAM13BQ9NYF5 915 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
LINC00544-201ENST00000400540 FAM221BA6H8Z2 402 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 KCNJ18B7U540 433 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 H0Y626 953 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 ZBTB24O43167 697 aaPredicted RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 ACTN4O43707 911 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TRIM16O95361 564 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 CAPNS1P04632 268 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 FTH1P19P0C7X4 201 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 CD58P19256 250 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 CD6P30203 668 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 ME1P48163 572 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 MFAP3P55082 362 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TRIP6Q15654 476 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 ZNF423Q2M1K9 1284 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 FYB2Q5VWT5 728 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 SPRYD3Q8NCJ5 442 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TAF4BQ92750 862 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 TOE1Q96GM8 510 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 PAGE5Q96GU1 130 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 GPR174Q9BXC1 333 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 MKRN2Q9H000 416 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 IL21RQ9HBE5 538 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 USP36Q9P275 1121 aaKnown RBP12.54□□□□□ -0.4
LINC00544-201ENST00000400540 RASAL2Q9UJF2 1139 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 CLEC4EQ9ULY5 219 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
LINC00544-201ENST00000400540 MEI4A8MW99 385 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 GFRA2O00451 464 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 KIF20AO95235 890 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PENKP01210 267 aaPredicted RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 NCAM1P13591 858 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 CORO1AP31146 461 aaKnown RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PLA2G4AP47712 749 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 KIF11P52732 1056 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PKP1Q13835 747 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 SYCP2LQ5T4T6 812 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PPP1R26Q5T8A7 1209 aaPredicted RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 KLHDC10Q6PID8 442 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PROSER1Q86XN7 944 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 TMC2Q8TDI7 906 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 TAS1R2Q8TE23 839 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 TMEM174Q8WUU8 243 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 SORCS1Q8WY21 1168 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 NT5C1AQ9BXI3 368 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 MIR1-1HGQ9H1L0 117 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 FAM124BQ9H5Z6 455 aaPredicted RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PRDM16Q9HAZ2 1276 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 PNPLA8Q9NP80 782 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 WSB2Q9NYS7 404 aaPredicted RBP12.53□□□□□ -0.4
LINC00544-201ENST00000400540 SUSD2Q9UGT4 822 aa12.53□□□□□ -0.4
LINC00544-201ENST00000400540 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.41
LINC00544-201ENST00000400540 PDXKO00764 312 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 CILPO75339 1184 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 F13A1P00488 732 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 SLFN14P0C7P3 912 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 GNSP15586 552 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 PRKCHP24723 683 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 RDXP35241 583 aaKnown RBP12.52□□□□□ -0.41
LINC00544-201ENST00000400540 GCLMP48507 274 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 TPMTP51580 245 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 VAMP7P51809 220 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 COPAP53621 1224 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 BNC1Q01954 994 aa12.52□□□□□ -0.41
LINC00544-201ENST00000400540 PPP3CAQ08209 521 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms