RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 TUSC3Q13454 348 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZBTB41Q5SVQ8 909 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 CPZQ66K79 652 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 E4F1Q66K89 784 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 NFRKBQ6P4R8 1299 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 BEND5Q7L4P6 421 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 SLFN11Q7Z7L1 901 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 FBXO11Q86XK2 927 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 UNC45BQ8IWX7 931 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZZZ3Q8IYH5 903 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 TBC1D21Q8IYX1 336 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 CCAR2Q8N163 923 aaKnown RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 SRBD1Q8N5C6 995 aaKnown RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 DNERQ8NFT8 737 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 IPMKQ8NFU5 416 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 OR1N1Q8NGS0 311 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 CYP2W1Q8TAV3 490 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 GDAP1Q8TB36 358 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 THAP4Q8WY91 577 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 IQCDQ96DY2 449 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 RNF125Q96EQ8 232 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZNF764Q96H86 408 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 DEFB118Q96PH6 123 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 TWNKQ96RR1 684 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 HGH1Q9BTY7 390 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ACAT2Q9BWD1 397 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 AMNQ9BXJ7 453 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ACE2Q9BYF1 805 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 CPVLQ9H3G5 476 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ABHD16BQ9H3Z7 469 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 RNPEPQ9H4A4 650 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 SYNCQ9H7C4 482 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 FANCFQ9NPI8 374 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 GDF2Q9UK05 429 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 CLCA2Q9UQC9 943 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 ZNF281Q9Y2X9 895 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 PCDHA2Q9Y5H9 948 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 TRIP12Q14669 1992 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 SCN10AQ9Y5Y9 1956 aa5.72□□□□□ -1.49
HMGB3P7-201ENST00000400214 MYH9P35579 1960 aaKnown RBP5.71□□□□□ -1.49
HMGB3P7-201ENST00000400214 C2orf71A6NGG8 1288 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 H3BNC9 293 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 RBAK-RBAKDNI3L0D1 243 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 SCDO00767 359 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CAPN9O14815 690 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 AURKAO14965 403 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 KIAA0355O15063 1070 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 FMO6PO60774 539 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 PPP1R11O60927 126 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 TFRCP02786 760 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CD3EP07766 207 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CELA2BP08218 269 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 PAMP19021 973 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CD33P20138 364 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 KCNC1P48547 511 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 HSD17B4P51659 736 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 HK3P52790 923 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 LGALS4P56470 323 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 RPS16P62249 146 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 RPS6P62753 249 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 SRSF11Q05519 484 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 MRPL28Q13084 256 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 BAATQ14032 418 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 ANKDD1AQ495B1 522 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 TIGD7Q6NT04 549 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 FIGNL1Q6PIW4 674 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 BLOC1S2Q6QNY1 142 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 KLHL17Q6TDP4 642 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 RNF207Q6ZRF8 634 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 DENND5BQ6ZUT9 1274 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 BBS12Q6ZW61 710 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CEP68Q76N32 757 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 RUFY3Q7L099 469 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 ARMCX2Q7L311 632 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CPLX4Q7Z7G2 160 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 GLIS1Q8NBF1 620 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CTCFLQ8NI51 663 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CSGALNACT1Q8TDX6 532 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 EID2BQ96D98 161 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 FAM120BQ96EK7 910 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 NEIL1Q96FI4 390 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 FEM1CQ96JP0 617 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 TMEM237Q96Q45 408 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 DDX23Q9BUQ8 820 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 LRRC2Q9BYS8 371 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 UBE2OQ9C0C9 1292 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 SMG9Q9H0W8 520 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 SEPSECSQ9HD40 501 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 ACSS2Q9NR19 701 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 SACM1LQ9NTJ5 587 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 DECR2Q9NUI1 292 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CHORDC1Q9UHD1 332 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 FBXL7Q9UJT9 491 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 TBX20Q9UMR3 447 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 DUSP12Q9UNI6 340 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 MRPL11Q9Y3B7 192 aaKnown RBP5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 PCDHB1Q9Y5F3 818 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 PCDHA1Q9Y5I3 950 aa5.71□□□□□ -1.5
HMGB3P7-201ENST00000400214 CFAP20Q9Y6A4 193 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms