RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 KCTD10Q9H3F6 313 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 GPATCH2LQ9NWQ4 482 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 ERAP1Q9NZ08 941 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 NINJ2Q9NZG7 142 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 UBA2Q9UBT2 640 aaPredicted RBP9.12□□□□□ -0.95
PTPRM-202ENST00000400053 TBX20Q9UMR3 447 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 SH3BP1Q9Y3L3 701 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 AKAP12Q02952 1782 aa9.12□□□□□ -0.95
PTPRM-202ENST00000400053 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PIK3CDO00329 1044 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SHBGP04278 402 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ARP10275 920 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GSTT1P30711 240 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GCLCP48506 637 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RAD23AP54725 363 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PRKCEQ02156 737 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 DMPKQ09013 629 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 MAPK11Q15759 364 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CCDC149Q6ZUS6 474 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 C15orf52Q6ZUT6 534 aaKnown RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 DENND5BQ6ZUT9 1274 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NEK10Q6ZWH5 1172 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NT5DC3Q86UY8 548 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CYP4Z2PQ8N1L4 340 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 EXD1Q8NHP7 514 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TAS1R2Q8TE23 839 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 UCMAQ8WVF2 138 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PYDC1Q8WXC3 89 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 OXNAD1Q96HP4 312 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GPR63Q9BZJ6 419 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RERGLQ9H628 205 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NEK6Q9HC98 313 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CHST12Q9NRB3 414 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RPS6KA5O75582 802 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PROSCO94903 275 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RAG1P15918 1043 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 EPB42P16452 691 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PSMC6P62333 389 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CUL2Q13617 745 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 EMC2Q15006 297 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SWT1Q5T5J6 900 aaKnown RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 KRT74Q7RTS7 529 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TRIM48Q8IWZ4 208 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 MICALL2Q8IY33 904 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 C10orf53Q8N6V4 93 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 MMP19Q99542 508 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 APOL2Q9BQE5 337 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 FRMD8P1Q9BZ68 369 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 FHDC1Q9C0D6 1143 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 MKL2Q9ULH7 1088 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TM9SF1O15321 606 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 EXTL3O43909 919 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PMPCBO75439 489 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 IL18RAPO95256 599 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 FCGR1AP12314 374 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CPA3P15088 417 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PECAM1P16284 738 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CAP2P40123 477 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PWP1Q13610 501 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SAMD3Q8N6K7 520 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RTL3Q8N8U3 475 aaKnown RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GPRASP2Q96D09 838 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TAAR1Q96RJ0 339 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NAT9Q9BTE0 207 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NT5C1AQ9BXI3 368 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PIGUQ9H490 435 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TADA2AO75478 443 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PARNO95453 639 aaKnown RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RARBP10826 455 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 VCLP18206 1134 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PTDSS1P48651 473 aaKnown RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SLC16A1P53985 500 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ITGA9Q13797 1035 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 MRNIPQ6NTE8 343 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 AGBL3Q8NEM8 1001 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 GRIP2Q9C0E4 1043 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 KLHL28Q9NXS3 571 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SIK3Q9Y2K2 1263 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 BMP10O95393 424 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ELK3P41970 407 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ITGA1P56199 1179 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 NEDD8Q15843 81 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 AGKQ53H12 422 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ARHGAP15Q53QZ3 475 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ERMARDQ5T6L9 678 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 LRRC8DQ7L1W4 858 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 EMC1Q8N766 993 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 KYQ8NBH2 561 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 SLITRK1Q96PX8 696 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 TBC1D10AQ9BXI6 508 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 PIF1Q9H611 641 aa9.11□□□□□ -0.95
PTPRM-202ENST00000400053 COPS7BQ9H9Q2 264 aaPredicted RBP9.11□□□□□ -0.95
PTPRM-202ENST00000400053 CLIC5Q9NZA1 410 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms