RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ADAM7Q9H2U9 754 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 PIF1Q9H611 641 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 RAB6BQ9NRW1 208 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 PRLP01236 227 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 TNNC2P02585 160 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 HLA-DOAP06340 250 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 ACTR3P61158 418 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 CENPCQ03188 943 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 ABCB5Q2M3G0 1257 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 EMC10Q5UCC4 262 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 ERI1Q8IV48 349 aaKnown RBP14.17□□□□□ -0.14
RUNX3-203ENST00000399916 ZMYM2Q9UBW7 1377 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 SH3PXD2BA1X283 911 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 RGL2O15211 777 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 GARSP41250 739 aaKnown RBP14.17□□□□□ -0.14
RUNX3-203ENST00000399916 NME5P56597 212 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 PLCL1Q15111 1095 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 PTPN20Q4JDL3 420 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 SPDYCQ5MJ68 293 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 GALNT6Q8NCL4 622 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 FAM156AQ8NDB6 213 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 AP4E1Q9UPM8 1137 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 ORC6Q9Y5N6 252 aa14.17□□□□□ -0.14
RUNX3-203ENST00000399916 COL16A1Q07092 1604 aaPredicted RBP14.17□□□□□ -0.14
RUNX3-203ENST00000399916 FASTKD3Q14CZ7 662 aaKnown RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 FAM182AQ5T1J6 154 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 DNAAF3Q8N9W5 541 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 FAM172AQ8WUF8 416 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 HES6Q96HZ4 224 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 SLC39A3Q9BRY0 314 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 RAD21L1Q9H4I0 556 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ZFYVE28Q9HCC9 887 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 GRHL1Q9NZI5 618 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 NARFQ9UHQ1 456 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 F8W8V4 182 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 EIF3FO00303 357 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 PIK3CDO00329 1044 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ECHS1P30084 290 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 CCT3P49368 545 aaKnown RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ANKDD1AQ495B1 522 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 HORMAD1Q86X24 394 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 CCDC60Q8IWA6 550 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 LRRC57Q8N9N7 239 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 HAS1Q92839 578 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 FRMD8Q9BZ67 464 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 BCAS3Q9H6U6 928 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ZDHHC18Q9NUE0 388 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ATF5Q9Y2D1 282 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 NHSL1Q5SYE7 1610 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 WDR47O94967 919 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 SGPL1O95470 568 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 CYP1A1P04798 512 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ALDH4A1P30038 563 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 RCVRNP35243 200 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 SESN2P58004 480 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 OSTNP61366 133 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 NFIXQ14938 502 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 SLC15A2Q16348 729 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 CCDC33Q8N5R6 958 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 KYQ8NBH2 561 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 POMGNT1Q8WZA1 660 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 KLHL32Q96NJ5 620 aa14.16□□□□□ -0.14
RUNX3-203ENST00000399916 ZNF395Q9H8N7 513 aaPredicted RBP14.16□□□□□ -0.14
RUNX3-203ENST00000399916 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 LYPLA1O75608 230 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SERPINH1P50454 418 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 CCNG1P51959 295 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 LRP8Q14114 963 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 PON2Q15165 354 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 MTX3Q5HYI7 312 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SYDE1Q6ZW31 735 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SLC51AQ86UW1 340 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 TMIGD2Q96BF3 282 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 POLE4Q9NR33 117 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 A0A1W2PQ72 361 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SNTNA6NMZ2 147 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 MZF1P28698 734 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 CLK3P49761 638 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 TMEM119Q4V9L6 283 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 DUS1LQ6P1R4 473 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 RNF135Q8IUD6 432 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 FAM71DQ8N9W8 422 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 BHMTQ93088 406 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 DHX35Q9H5Z1 703 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 CLK4Q9HAZ1 481 aaKnown RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SYNJ2BP-COX16A0A087WUM0 186 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 KRT19P08727 400 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 SLURP2P0DP57 97 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 PSMB9P28065 219 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 POU5F1BQ06416 359 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 ZNF423Q2M1K9 1284 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
RUNX3-203ENST00000399916 ARSHQ5FYA8 562 aa14.15□□□□□ -0.14
RUNX3-203ENST00000399916 TTC30AQ86WT1 665 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms