RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 PKNOX1P55347 436 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DARS2Q6PI48 645 aaKnown RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 PCGF5Q86SE9 256 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 CCDC60Q8IWA6 550 aaPredicted RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 ACSS2Q9NR19 701 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 PARVAQ9NVD7 372 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 PNPOQ9NVS9 261 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DNAJB4Q9UDY4 337 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 PLLPQ9Y342 182 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 SNCAIPQ9Y6H5 919 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 TRIM43BA6NCK2 446 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 WDR64B1ANS9 1081 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DNAJA2O60884 412 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 SNRPAP09012 282 aaKnown RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DHRS4L1P0CG22 281 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 MLH1P40692 756 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 GRM2Q14416 872 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 SEZ6Q53EL9 994 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 TTC39BQ5VTQ0 682 aaPredicted RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 GIPC3Q8TF64 312 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 CIDEBQ9UHD4 219 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DMTF1Q9Y222 760 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 GNEQ9Y223 722 aaKnown RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 CD48P09326 243 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 GMPRP36959 345 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 NPTX2P47972 431 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 EIF3EP60228 445 aaKnown RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 TREML2Q5T2D2 321 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 CCDC33Q8N5R6 958 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 SLC44A1Q8WWI5 657 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 TMEM143Q96AN5 459 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 TSPYL2Q9H2G4 693 aaPredicted RBP17.64■□□□□ 0.41
PTPRA-205ENST00000399903 SCINQ9Y6U3 715 aa17.64■□□□□ 0.41
PTPRA-205ENST00000399903 DNAH12Q6ZR08 3092 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 SIN3BO75182 1162 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 RBP3P10745 1247 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 SERPINB5P36952 375 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 ACOT2P49753 483 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 ENTPD1P49961 510 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 GPC3P51654 580 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 SP2Q02086 613 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 FRMD7Q6ZUT3 714 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 LPCAT2Q7L5N7 544 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 LZICQ8WZA0 190 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 RAB6BQ9NRW1 208 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 TBC1D22BQ9NU19 505 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 TBC1D30Q9Y2I9 924 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 H7C0C1 242 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 TNFAIP8O95379 198 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 FGFR3P22607 806 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 ATP5OP48047 213 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 RARS2Q5T160 578 aaKnown RBP17.63■□□□□ 0.41
PTPRA-205ENST00000399903 NPNTQ6UXI9 565 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 KYAT3Q6YP21 454 aaKnown RBP17.63■□□□□ 0.41
PTPRA-205ENST00000399903 SLC26A11Q86WA9 606 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 PHTF2Q8N3S3 785 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 NAT8LQ8N9F0 302 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 RNF169Q8NCN4 708 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 RIN3Q8TB24 985 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 SEMA6AQ9H2E6 1030 aa17.63■□□□□ 0.41
PTPRA-205ENST00000399903 ZC3H7BQ9UGR2 993 aaKnown RBP17.63■□□□□ 0.41
PTPRA-205ENST00000399903 GOLGA8QA0A0J9YX86 632 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 GOLGA8OA6NCC3 632 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 GOLGA8NF8WBI6 632 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 FAM58BPP0C7Q3 252 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 MYBPC1Q00872 1141 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 FASTKD1Q53R41 847 aaKnown RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 DCAF15Q66K64 600 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 ANKRD23Q86SG2 305 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 VSIG10LQ86VR7 867 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PQLC1Q8N2U9 271 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PGBD4Q96DM1 585 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 ZDHHC7Q9NXF8 308 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 SLC9A2Q9UBY0 812 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 A0A0B4J269 797 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 ADM5C9JUS6 153 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 NEMP1O14524 444 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 NUDT2P50583 147 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 NOMO3P69849 1222 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 MRPS5P82675 430 aaKnown RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 OGDHQ02218 1023 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PDPK2PQ6A1A2 396 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PATL1Q86TB9 770 aaKnown RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 GRIN3AQ8TCU5 1115 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 KMT5AQ9NQR1 393 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 CLEC11AQ9Y240 323 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 ADCY6O43306 1168 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 HLA-DRAP01903 254 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PSMA2P25787 234 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 WDR78Q5VTH9 848 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 BSPRYQ5W0U4 402 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 ZSCAN18Q8TBC5 510 aaPredicted RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 C7orf26Q96N11 449 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 CNTN3Q9P232 1028 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 FARP1Q9Y4F1 1045 aaPredicted RBP17.62■□□□□ 0.41
PTPRA-205ENST00000399903 PCDHA10Q9Y5I2 948 aa17.62■□□□□ 0.41
PTPRA-205ENST00000399903 FZD9O00144 591 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms