RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 KCNQ3O43525 872 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PTPROQ16827 1216 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CDO1Q16878 200 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 FAM20CQ8IXL6 584 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 BRSK1Q8TDC3 778 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 GJA10Q969M2 543 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PGBD4Q96DM1 585 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SPATA5L1Q9BVQ7 753 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SLC9A2Q9UBY0 812 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PRKAG3Q9UGI9 489 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CRYL1Q9Y2S2 319 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CSPG5O95196 566 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SERPINF2P08697 491 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 MAZP56270 477 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 PNOCQ13519 176 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SKIV2LQ15477 1246 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 DGKDQ16760 1214 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 GPR139Q6DWJ6 353 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CCDC71Q8IV32 467 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 TMEM35BQ8NCS4 154 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 RIT1Q92963 219 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SIPA1Q96FS4 1042 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SUCOQ9UBS9 1254 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 PPIEQ9UNP9 301 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 GRIK3Q13003 919 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PDIA2Q13087 525 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZNF613Q6PF04 617 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ADHFE1Q8IWW8 467 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CHKBQ9Y259 395 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PCDHGB5Q9Y5G0 923 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ERP29P30040 261 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 NECAB2Q7Z6G3 386 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ATPAF2Q8N5M1 289 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZNF614Q8N883 585 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PRMT1Q99873 361 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 WWOXQ9NZC7 414 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ANO9A1A5B4 782 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PTPRNQ16849 979 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 YTHDF3Q7Z739 585 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 WDSUB1Q8N9V3 476 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 C15orf40Q8WUR7 153 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ACAT2Q9BWD1 397 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PARD6BQ9BYG5 372 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZNF532Q9HCE3 1301 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SBNO2Q9Y2G9 1366 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 TCEA2Q15560 299 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 FAM83HQ6ZRV2 1179 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 NACC2Q96BF6 587 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 DAGLAQ9Y4D2 1042 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PCDHGB7Q9Y5F8 929 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 V9GY48 417 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 TEX51A0A1B0GUA7 166 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 BHMG1C9JSJ3 638 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 CD2P06729 351 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 POLBP06746 335 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 RGS19P49795 217 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ENOSF1Q7L5Y1 443 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PCDHA1Q9Y5I3 950 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 DOCK7Q96N67 2140 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 GNG14A0A1W2PPG7 69 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 C2orf74A8MZ97 194 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CHST10O43529 356 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SLC28A2O43868 658 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 H2AFXP16104 143 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 CALB2P22676 271 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 GARNL3Q5VVW2 1013 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ERO1BQ86YB8 467 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZBTB8BQ8NAP8 495 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 TASP1Q9H6P5 420 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SLC39A1Q9NY26 324 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 PCDH10Q9P2E7 1040 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ANGPTL7O43827 346 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CSF1RP07333 972 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ADAM8P78325 824 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CCDC58Q4VC31 144 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 TWF2Q6IBS0 349 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 KCNS3Q9BQ31 491 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SPATA9Q9BWV2 254 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 UBE2TQ9NPD8 197 aaPredicted RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 TLR7Q9NYK1 1049 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 MFHAS1Q9Y4C4 1052 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 NACAE9PAV3 2078 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 CASRP41180 1078 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ENY2Q9NPA8 101 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 OR2AT4A6NND4 320 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SCAF4O95104 1147 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 MATKP42679 507 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 RAB5BP61020 215 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZNF667Q5HYK9 610 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 DDX53Q86TM3 631 aaKnown RBP8.8□□□□□ -1
CACNA1C-220ENST00000399655 SDR16C5Q8N3Y7 309 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ERP27Q96DN0 273 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 SLC39A10Q9ULF5 831 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 ZNF232Q9UNY5 417 aa8.8□□□□□ -1
CACNA1C-220ENST00000399655 LOC100506127A0A0U1RQW1 187 aa8.79□□□□□ -1
CACNA1C-220ENST00000399655 TADA2AO75478 443 aa8.79□□□□□ -1
CACNA1C-220ENST00000399655 CRTAPO75718 401 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms