RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 C7orf31Q8N865 590 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 SIGLEC10Q96LC7 697 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 PLAC1Q9HBJ0 212 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 PLLPQ9Y342 182 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 CXorf49A8MYA2 514 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 GPR32O75388 356 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 CBX6O95503 412 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 GBE1Q04446 702 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 SEMA5AQ13591 1074 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 WASHC2DQ5SRD0 308 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 RSRC1Q96IZ7 334 aaKnown RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 ZNF560Q96MR9 790 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 CSPG4P5Q96PW8 444 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 KCTD15Q96SI1 283 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 DPEP3Q9H4B8 488 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 SETD4Q9NVD3 440 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 MTMR10Q9NXD2 777 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 RCOR3Q9P2K3 495 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 HEY2Q9UBP5 337 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 MORF4L1Q9UBU8 362 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 A0A0G2JND7 137 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 DCAF8L1A6NGE4 600 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 FAM159BA6NKW6 160 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 HAUS5O94927 633 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 METTL18O95568 372 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 TFE3P19532 575 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 AXLP30530 894 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 ELF1P32519 619 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 GNL1P36915 607 aaPredicted RBP23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 PNPLA4P41247 253 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 CDK16Q00536 496 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 FBXO47Q5MNV8 452 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 IQSEC1Q6DN90 963 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 KCNT2Q6UVM3 1135 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 CYS1Q717R9 158 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 SH3TC2Q8TF17 1288 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 SNX25Q9H3E2 840 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 GDAP2Q9NXN4 497 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC5A4Q9NY91 659 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 PCDHA11Q9Y5I1 949 aa23.9■■□□□ 1.42
RABGGTA-202ENST00000399409 PDHXO00330 501 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 PIRO00625 290 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 XPOTO43592 962 aaKnown RBP23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 MAP3K6O95382 1288 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 ADORA2BP29275 332 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC10A2Q12908 348 aaPredicted RBP23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 EFHC1Q5JVL4 640 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 HEATR6Q6AI08 1181 aaKnown RBP23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 ZNF534Q76KX8 674 aa23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 PSTKQ8IV42 348 aaKnown RBP23.89■■□□□ 1.42
RABGGTA-202ENST00000399409 TRIP11Q15643 1979 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 IBSPP21815 317 aaPredicted RBP23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 FDFT1P37268 417 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 CCNG1P51959 295 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 ATG16L1Q676U5 607 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 DPP9Q86TI2 863 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 FAM13CQ8NE31 585 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 NSMCE1Q8WV22 266 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 KBTBD7Q8WVZ9 684 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 TMEM120AQ9BXJ8 343 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 TRIM6Q9C030 488 aaPredicted RBP23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 FAM49AQ9H0Q0 323 aaPredicted RBP23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 ABHD16BQ9H3Z7 469 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 KCNK13Q9HB14 408 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 MAD1L1Q9Y6D9 718 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 KAT6AQ92794 2004 aa23.89■■□□□ 1.41
RABGGTA-202ENST00000399409 I3L4J1 428 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 RFPL1O75677 317 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 RECQL4O94761 1208 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 DLDP09622 509 aaKnown RBP23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 LCP1P13796 627 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 CCDC130P13994 396 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 CNTFP26441 200 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 HACE1Q8IYU2 909 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 RAB3IL1Q8TBN0 382 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 CLEC4CQ8WTT0 213 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 SKA1Q96BD8 255 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 ANKRD27Q96NW4 1050 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 SMYD2Q9NRG4 433 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 GINS2Q9Y248 185 aa23.88■■□□□ 1.41
RABGGTA-202ENST00000399409 SMIM35A0A1B0GVV1 85 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 KPNA7A9QM74 516 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 CCDC22O60826 627 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 DGKIO75912 1065 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 MLNP12872 115 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 DARSP14868 501 aaKnown RBP23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 ARL4AP40617 200 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 GLRA4Q5JXX5 417 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 TFB1MQ8WVM0 346 aaKnown RBP23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 NSL1Q96IY1 281 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 C7orf26Q96N11 449 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 LPIN3Q9BQK8 851 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 UNCXA6NJT0 531 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 E7ENQ6 273 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 PDGFRBP09619 1106 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 EPHX2P34913 555 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 ZBTB16Q05516 673 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 KRT72Q14CN4 511 aa23.87■■□□□ 1.41
RABGGTA-202ENST00000399409 FAM91A1Q658Y4 838 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms