RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MPP3Q13368 585 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 KATNAL2Q8IYT4 538 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ST13P5Q8NFI4 369 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TRPC4APQ8TEL6 797 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 UROC1Q96N76 676 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 PI4K2AQ9BTU6 479 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 NLNQ9BYT8 704 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CAAP1Q9H8G2 361 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 KRT84Q9NSB2 600 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP39A1Q9NYL5 469 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CLUHO75153 1309 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TNFAIP8O95379 198 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RPN2P04844 631 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP3A4P08684 503 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP2C18P33260 490 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 IFNGR2P38484 337 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SKIV2L2P42285 1042 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF571Q7Z3V5 609 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 EID3Q8N140 333 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 PCSK9Q8NBP7 692 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ACTRT2Q8TDY3 377 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 FBXO32Q969P5 355 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RTFDC1Q9BY42 306 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 PHACTR1Q9C0D0 580 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 MAF1Q9H063 256 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 DNPEPQ9ULA0 475 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 NCANO14594 1321 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 MROH2AA6NES4 1674 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 H3BMM5 538 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SNAP23O00161 211 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 KPNA4O00629 521 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TRIM66O15016 1216 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RAD51BO15315 384 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SUPT7LO94864 414 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ASS1P00966 412 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CYP2A6P11509 494 aaPredicted RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 GP5P40197 560 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CD151P48509 253 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 CCNG1P51959 295 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ITGA1P56199 1179 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TBL3Q12788 808 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SLC44A4Q53GD3 710 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ANGEL2Q5VTE6 544 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ZPBP2Q6X784 338 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 YTHDF3Q7Z739 585 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TXNRD3Q86VQ6 643 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ZCCHC9Q8N567 271 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ZNF398Q8TD17 642 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 TBL1YQ9BQ87 522 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 C9orf16Q9BUW7 83 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 MTMR12Q9C0I1 747 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 KCTD10Q9H3F6 313 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ASB7Q9H672 318 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ANKZF1Q9H8Y5 726 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 SPASTQ9UBP0 616 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 HAO1Q9UJM8 370 aa8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 RPL26L1Q9UNX3 145 aaKnown RBP8.59□□□□□ -1.03
SPTLC3-201ENST00000399002 ERI2A8K979 691 aaKnown RBP8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 CHADO15335 359 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 GRAP2O75791 330 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 DGKIO75912 1065 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 DLGAP3O95886 979 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 KRT6AP02538 564 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 KRT6BP04259 564 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 C6orf222P0C671 652 aaPredicted RBP8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 PTPN3P26045 913 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 KRT6CP48668 564 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 PTPN11Q06124 597 aaPredicted RBP8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 LYPLAL1Q5VWZ2 237 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF280DQ6N043 979 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 METTL7BQ6UX53 244 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 CCDC103Q8IW40 242 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 TRIM48Q8IWZ4 208 aa8.59□□□□□ -1.04
SPTLC3-201ENST00000399002 CCL15-CCL14A0A0B4J2E2 113 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 UBXN8O00124 270 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 TOB1P50616 345 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CCT8P50990 548 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 SEC24CP53992 1094 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CCL15Q16663 113 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 DDR2Q16832 855 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC36Q1X8D7 754 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 C11orf88Q6PI97 169 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 KRT73Q86Y46 540 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 OR56A4Q8NGH8 313 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MDM1Q8TC05 714 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 OXNAD1Q96HP4 312 aaPredicted RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ZCCHC2Q9C0B9 1178 aaKnown RBP8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 LNPEPQ9UIQ6 1025 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 CORO2BQ9UQ03 480 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM220BPB1ANY3 271 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ZW10O43264 779 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 PDE5AO76074 875 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 RHOCP08134 193 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 EPHB3P54753 998 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 MEA1Q16626 185 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 STK40Q8N2I9 435 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC71Q8N4P6 559 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 COLGALT1Q8NBJ5 622 aa8.58□□□□□ -1.04
SPTLC3-201ENST00000399002 ATG4CQ96DT6 458 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms