RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 SLC25A52Q3SY17 297 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 NCBP2-AS2Q69YL0 99 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 KCNT2Q6UVM3 1135 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 PIGZQ86VD9 579 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 LRRC6Q86X45 466 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 CTAGE3PQ8IX95 158 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 NME8Q8N427 588 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 KLHL29Q96CT2 875 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 APOPT1Q96IL0 206 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 HNRNPABQ99729 332 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 MAGEB5Q9BZ81 275 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 AP5M1Q9H0R1 490 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 DTLQ9NZJ0 730 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 WDR91A4D1P6 747 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 TRDMT1O14717 391 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 DCTN3O75935 186 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 GNAT1P11488 350 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 GOT1P17174 413 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 TPSB2P20231 275 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 SULT1E1P49888 294 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 BEX3Q00994 111 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 TTC39BQ5VTQ0 682 aaPredicted RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 FYB2Q5VWT5 728 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 TWF2Q6IBS0 349 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 OTOAQ7RTW8 1153 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 PRPF39Q86UA1 669 aaKnown RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 FAM131BQ86XD5 332 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 DEFB106AQ8N104 65 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 DUSP16Q9BY84 665 aa14.34□□□□□ -0.11
PRAME-202ENST00000398743 RCOR3Q9P2K3 495 aaPredicted RBP14.34□□□□□ -0.11
PRAME-202ENST00000398743 DAB1O75553 588 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 KRT37O76014 449 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 C1QAP02745 245 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 GSTA2P09210 222 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 CCNB1P14635 433 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 NPR3P17342 541 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 PRKCHP24723 683 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 LRPAP1P30533 357 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 MAGEA3P43357 314 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 KCNJ2P63252 427 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 SLC18A2Q05940 514 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 BZW1Q7L1Q6 419 aaKnown RBP14.33□□□□□ -0.11
PRAME-202ENST00000398743 OSTM1Q86WC4 334 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 PSTKQ8IV42 348 aaKnown RBP14.33□□□□□ -0.11
PRAME-202ENST00000398743 ZNF276Q8N554 614 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 PPM1NQ8N819 430 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 TFB1MQ8WVM0 346 aaKnown RBP14.33□□□□□ -0.11
PRAME-202ENST00000398743 LRRC37BQ96QE4 947 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 ZNF180Q9UJW8 692 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 FZD10Q9ULW2 581 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 USP3Q9Y6I4 520 aa14.33□□□□□ -0.11
PRAME-202ENST00000398743 HACD1B0YJ81 288 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 IGF2BP3O00425 579 aaKnown RBP eCLIP14.33□□□□□ -0.12
PRAME-202ENST00000398743 CYB561D2O14569 222 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 UNC5CO95185 931 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 APOEP02649 317 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 PYGBP11216 843 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 AMPD1P23109 780 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 NEK3P51956 506 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 MRPS5P82675 430 aaKnown RBP14.33□□□□□ -0.12
PRAME-202ENST00000398743 GPR162Q16538 588 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 CCL14Q16627 93 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 DCAF6Q58WW2 860 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 LGSNQ5TDP6 509 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 SH2D5Q6ZV89 423 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 ZNF534Q76KX8 674 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 PYROXD2Q8N2H3 581 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 CCDC33Q8N5R6 958 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 C10orf82Q8WW14 230 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 ERP27Q96DN0 273 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 OLFM3Q96PB7 478 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 MYLK2Q9H1R3 596 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.12
PRAME-202ENST00000398743 MANSC1Q9H8J5 431 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 CD248Q9HCU0 757 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 TXLNGQ9NUQ3 528 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 CHKBQ9Y259 395 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 Q9Y3F1 56 aa14.33□□□□□ -0.12
PRAME-202ENST00000398743 PDCD11Q14690 1871 aaKnown RBP14.33□□□□□ -0.12
PRAME-202ENST00000398743 PTGESO14684 152 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 ATP6V1G2O95670 118 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 SNRPAP09012 282 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 TROVE2P10155 538 aaKnown RBP eCLIP14.32□□□□□ -0.12
PRAME-202ENST00000398743 PTPN1P18031 435 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 ACAT1P24752 427 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 SEMA5AQ13591 1074 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 ASRGL1Q7L266 308 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 IQCGQ9H095 443 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 PLAC1Q9HBJ0 212 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 LRRC4Q9HBW1 653 aa14.32□□□□□ -0.12
PRAME-202ENST00000398743 XAB2Q9HCS7 855 aaKnown RBP14.32□□□□□ -0.12
PRAME-202ENST00000398743 ARHGEF3Q9NR81 526 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms