RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 RBBP8NLQ8NC74 664 aaPredicted RBP12.67□□□□□ -0.38
TFF3-202ENST00000398431 BHMTQ93088 406 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 JAKMIP2Q96AA8 810 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 PNPLA8Q9NP80 782 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 ITM2CQ9NQX7 267 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
TFF3-202ENST00000398431 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
TFF3-202ENST00000398431 CLEC4EQ9ULY5 219 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 TRAF3IP3Q9Y228 551 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 SLC27A6Q9Y2P4 619 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 PCDHA5Q9Y5H7 936 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
TFF3-202ENST00000398431 KCNJ18B7U540 433 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 MAPK13O15264 365 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 SH3BP5O60239 455 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 CILPO75339 1184 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 CLSTN1O94985 981 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 PENKP01210 267 aaPredicted RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 VAMP7P51809 220 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 MFAP3P55082 362 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 GEN1Q17RS7 908 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 FUT11Q495W5 492 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 C10orf120Q5SQS8 335 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 PPP1R26Q5T8A7 1209 aaPredicted RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 FYB2Q5VWT5 728 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 CEP135Q66GS9 1140 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 CCDC186Q7Z3E2 898 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 RABEPKQ7Z6M1 372 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 CEP57L1Q8IYX8 460 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 ZCCHC14Q8WYQ9 949 aaKnown RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 DNASE2BQ8WZ79 361 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 NT5C1AQ9BXI3 368 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 DUSP16Q9BY84 665 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 MKRN2Q9H000 416 aaKnown RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 CYP3A43Q9HB55 503 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 USP36Q9P275 1121 aaKnown RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 THAP10Q9P2Z0 257 aaPredicted RBP12.66□□□□□ -0.38
TFF3-202ENST00000398431 PLXNB3Q9ULL4 1909 aa12.66□□□□□ -0.38
TFF3-202ENST00000398431 ZFYVE26Q68DK2 2539 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 SPEGQ15772 3267 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
TFF3-202ENST00000398431 NDUFS2O75306 463 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 SYPP08247 313 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 CD6P30203 668 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 IL12RB1P42701 662 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 GCLMP48507 274 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 DNM1Q05193 864 aaKnown RBP12.65□□□□□ -0.38
TFF3-202ENST00000398431 GOLGA8FQ08AF8 430 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 GOLGA8DPQ0D2H9 430 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 SLC14A1Q13336 389 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 PLEKHG6Q3KR16 790 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 ATL3Q6DD88 541 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 RGL4Q8IZJ4 473 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 TOE1Q96GM8 510 aaKnown RBP12.65□□□□□ -0.38
TFF3-202ENST00000398431 PIWIL1Q96J94 861 aaKnown RBP12.65□□□□□ -0.38
TFF3-202ENST00000398431 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.38
TFF3-202ENST00000398431 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 CLIC5Q9NZA1 410 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 PKD1L2Q7Z442 2459 aa12.65□□□□□ -0.38
TFF3-202ENST00000398431 DMXL2Q8TDJ6 3036 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 A0A1B0GVL5 298 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 H0Y626 953 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 TRIM16O95361 564 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 TRIM49P0CI25 452 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 TRIM49CP0CI26 452 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 CD58P19256 250 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 CMA1P23946 247 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 PSEN1P49768 467 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 BNC1Q01954 994 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 RING1Q06587 406 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 HNRNPDQ14103 355 aaKnown RBP12.64□□□□□ -0.39
TFF3-202ENST00000398431 TRIP6Q15654 476 aaKnown RBP12.64□□□□□ -0.39
TFF3-202ENST00000398431 NFIL3Q16649 462 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 TMEM215Q68D42 235 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 KIAA1324Q6UXG2 1013 aaKnown RBP12.64□□□□□ -0.39
TFF3-202ENST00000398431 TMPRSS6Q8IU80 811 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 SEMA4DQ92854 862 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 FOXJ1Q92949 421 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 GPR174Q9BXC1 333 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 PRDM16Q9HAZ2 1276 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
TFF3-202ENST00000398431 HPSEQ9Y251 543 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 ZNF510Q9Y2H8 683 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 FRMD4BQ9Y2L6 1034 aa12.64□□□□□ -0.39
TFF3-202ENST00000398431 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 METTL12A8MUP2 240 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 CALUO43852 315 aaPredicted RBP12.63□□□□□ -0.39
TFF3-202ENST00000398431 CBFA2T3O75081 653 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 HMBSP08397 361 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 RALAP11233 206 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 PFKFB1P16118 471 aa12.63□□□□□ -0.39
TFF3-202ENST00000398431 CHKAP35790 457 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms