RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 BBS7Q8IWZ6 715 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 SPC24Q8NBT2 197 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 EPHX3Q9H6B9 360 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 HEBP1Q9NRV9 189 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 COL4A3Q01955 1670 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 FTLP02792 175 aaPredicted RBP26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 HPS4Q9NQG7 708 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 SYNJ2BP-COX16A0A087WUM0 186 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 ATMINO43313 823 aaPredicted RBP26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 KLKB1P03952 638 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 GZMAP12544 262 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 FLT3P36888 993 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 SCNN1AP37088 669 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 PFKPQ01813 784 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 EMC1Q8N766 993 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 COX16Q9P0S2 106 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 TMEM59LQ9UK28 342 aa26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 LSM7Q9UK45 103 aaKnown RBP26.46■■□□□ 1.83
TMEM55B-202ENST00000398020 OTOL1A6NHN0 477 aaPredicted RBP26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 RTN2O75298 545 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 TRUB2O95900 331 aaKnown RBP26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 RRM1P23921 792 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 CORO1AP31146 461 aaKnown RBP26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 MATKP42679 507 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 SIGLEC14Q08ET2 396 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 EML3Q32P44 896 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 TRNP1Q6NT89 227 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 HTR3DQ70Z44 454 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 CSGALNACT1Q8TDX6 532 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 FAM204AQ9H8W3 233 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 WDR35Q9P2L0 1181 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 HBS1LQ9Y450 684 aaKnown RBP26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 COL4A2P08572 1712 aa26.45■■□□□ 1.82
TMEM55B-202ENST00000398020 GOLGA6L3A6NEY3 463 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 CDC25BP30305 580 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 SOX9P48436 509 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 TBX4P57082 545 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 CDK17Q00537 523 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 GFPT1Q06210 699 aaPredicted RBP26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 PDGFRLQ15198 375 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 SIX5Q8N196 739 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 JOSD2Q8TAC2 188 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 DNASE1L2Q92874 299 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 SERPINB11Q96P15 392 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 DEF6Q9H4E7 631 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 GRPEL1Q9HAV7 217 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 DLL1O00548 723 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 TFE3P19532 575 aaPredicted RBP26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 NOS2P35228 1153 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 RUNX3Q13761 415 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 TRIP4Q15650 581 aaPredicted RBP26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 SLC44A4Q53GD3 710 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 TRIM67Q6ZTA4 783 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 DENND1CQ8IV53 801 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 C3orf20Q8ND61 904 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 ATP2A3Q93084 1043 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 PLD4Q96BZ4 506 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 SELENOOQ9BVL4 669 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 ADAM33Q9BZ11 813 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 DDIT4Q9NX09 232 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 CALCOCO1Q9P1Z2 691 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 WNT16Q9UBV4 365 aa26.44■■□□□ 1.82
TMEM55B-202ENST00000398020 TECTAO75443 2155 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 KRBA1A5PL33 1030 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 KRT3P12035 628 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 GSCP56915 257 aaPredicted RBP26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 PPP1R2P3Q6NXS1 205 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 DNAJC24Q6P3W2 148 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 Q6ZNB5 142 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 CFAP57Q96MR6 1250 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 ISCUQ9H1K1 167 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 NHEJ1Q9H9Q4 299 aaPredicted RBP26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 ARHGEF3Q9NR81 526 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 TBC1D14Q9P2M4 693 aa26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 AGO1Q9UL18 857 aaKnown RBP26.43■■□□□ 1.82
TMEM55B-202ENST00000398020 SLC9A3R1O14745 358 aaPredicted RBP26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 IGLV3-25P01717 112 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 ABCB4P21439 1286 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 KPNA1P52294 538 aaPredicted RBP26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 NME3Q13232 169 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 MAPK8IP2Q13387 824 aaPredicted RBP26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 ITPRIPL2Q3MIP1 535 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 CCDC122Q5T0U0 273 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 OTUD1Q5VV17 481 aaPredicted RBP26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 ALKBH5Q6P6C2 394 aaKnown RBP26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 ADGRG2Q8IZP9 1017 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 VCPIP1Q96JH7 1222 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 ECT2Q9H8V3 914 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 TRPV5Q9NQA5 729 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 TLR6Q9Y2C9 796 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 PIAS3Q9Y6X2 628 aa26.42■■□□□ 1.82
TMEM55B-202ENST00000398020 SSU72P8A0A1W2PR75 194 aa26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 TCRBV5S1A1TA0A578 114 aa26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 M0QYT0 321 aa26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 IRAK2O43187 625 aa26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 IGLV3-27P01718 113 aa26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 RFC1P35251 1148 aaPredicted RBP26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 HARS2P49590 506 aaKnown RBP26.41■■□□□ 1.82
TMEM55B-202ENST00000398020 SULT1E1P49888 294 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms