RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FBXO44Q9H4M3 255 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 PLEKHA4Q9H4M7 779 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 RXFP1Q9HBX9 757 aa20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 NGRNQ9NPE2 291 aaKnown RBP20.13■□□□□ 0.81
PDLIM2-204ENST00000397760 PTPRDP23468 1912 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 KIAA1671Q9BY89 1806 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 TEX28O15482 410 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 FYNP06241 537 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 PYGMP11217 842 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 TFE3P19532 575 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 DR1Q01658 176 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 ZNF844Q08AG5 666 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 SLC25A52Q3SY17 297 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 ATP13A4Q4VNC1 1196 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 RAB6CQ53S08 254 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 SYPL2Q5VXT5 272 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 DENND5BQ6ZUT9 1274 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 TBCBQ99426 244 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 ERP44Q9BS26 406 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 C11orf84Q9BUA3 381 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 TXLNGYQ9BZA5 131 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 RAB6CQ9H0N0 254 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 NEUROG2Q9H2A3 272 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 PCSK1NQ9UHG2 260 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 USP18Q9UMW8 372 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 NAALADL1Q9UQQ1 740 aa20.12■□□□□ 0.81
PDLIM2-204ENST00000397760 SEC24AO95486 1093 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CA3P07451 260 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 NCAM1P13591 858 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 IL1R2P27930 398 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CHRNA3P32297 505 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SLC25A11Q02978 314 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 BSPRYQ5W0U4 402 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 TXNRD3NBQ6F5E7 133 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 AADACL2Q6P093 401 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SPRED2Q7Z698 418 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 YTHDF3Q7Z739 585 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 DDX42Q86XP3 938 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 KATNAL2Q8IYT4 538 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SPPL3Q8TCT6 385 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CENPIQ92674 756 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 FMO2Q99518 471 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 NCAPGQ9BPX3 1015 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 ZWILCHQ9H900 591 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CYP4F11Q9HBI6 524 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 HSFX1Q9UBD0 423 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 MTUS1Q9ULD2 1270 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 STAP1Q9ULZ2 295 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SCML2Q9UQR0 700 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 FAM169AQ9Y6X4 670 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 C5orf67F2Z3F1 127 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 RTN3O95197 1032 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 KRT7P08729 469 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CNPP09543 421 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SULT1E1P49888 294 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 ERVFC1P60507 584 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 USP46P62068 366 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 SEL1L2Q5TEA6 688 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 POLNQ7Z5Q5 900 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 CROCCP2Q86T23 111 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 GIPC2Q8TF65 315 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 POF1BQ8WVV4 589 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 EDEM1Q92611 657 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 NT5C3BQ969T7 300 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 TCF25Q9BQ70 676 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 ADAM33Q9BZ11 813 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 IL37Q9NZH6 218 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 PCYOX1Q9UHG3 505 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 PCDHA11Q9Y5I1 949 aa20.11■□□□□ 0.81
PDLIM2-204ENST00000397760 PHF2O75151 1096 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 TRUB2O95900 331 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 RB1P06400 928 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 ATF6P18850 670 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 YWHAQP27348 245 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 ELF1P32519 619 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 ATP1A2P50993 1020 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 HDAC4P56524 1084 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 YWHAGP61981 247 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 SCYL2Q6P3W7 929 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 STRADAQ7RTN6 431 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 TADA2BQ86TJ2 420 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 NPY6RQ99463 290 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 GDF15Q99988 308 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 TRIM62Q9BVG3 475 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 ENTPD7Q9NQZ7 604 aa20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 DDX56Q9NY93 547 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-204ENST00000397760 PRPSAP2O60256 369 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 PITX1P78337 314 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 SMTNL2Q2TAL5 461 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 EXD1Q8NHP7 514 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 UBLCP1Q8WVY7 318 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 CEP295NLQ96MC4 621 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 PEBP4Q96S96 227 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 KLHL11Q9NVR0 708 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 COMMD8Q9NX08 183 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 SLC38A8A6NNN8 435 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 CSPG5O95196 566 aa20.09■□□□□ 0.81
PDLIM2-204ENST00000397760 FAM107AO95990 144 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms