RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 CD274Q9NZQ7 290 aa11.08□□□□□ -0.64
CCDC40-204ENST00000397545 PCYOX1Q9UHG3 505 aa11.08□□□□□ -0.64
CCDC40-204ENST00000397545 SLC13A4Q9UKG4 626 aa11.08□□□□□ -0.64
CCDC40-204ENST00000397545 SOX13Q9UN79 622 aa11.08□□□□□ -0.64
CCDC40-204ENST00000397545 TIMM13Q9Y5L4 95 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-204ENST00000397545 EME2A4GXA9 379 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 AP1G2O75843 785 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 KRT36O76013 467 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 B3GAT3O94766 335 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 FKBP9O95302 570 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 MGAT1P26572 445 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PLK1P53350 603 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 BACE1P56817 501 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CNTN2Q02246 1040 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TWF1Q12792 350 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PTK2BQ14289 1009 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CSHL1Q14406 222 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 POU6F1Q14863 301 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 WASHC2DQ5SRD0 308 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 FKBP9P1Q75LS8 142 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 LENG9Q96B70 501 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TSPAN17Q96FV3 270 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 MOSPD1Q9UJG1 213 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 A0A1W2PPM1 405 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 SPTLC1O15269 473 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PSMD10O75832 226 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CD4P01730 458 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PSMC3P17980 439 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CYP2B6P20813 491 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 FDFT1P37268 417 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 HDAC4P56524 1084 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 ABCE1P61221 599 aaKnown RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 LAMTOR4Q0VGL1 99 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PDK2Q15119 407 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 DGKDQ16760 1214 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 LY6KQ17RY6 165 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 THEMIS2Q5TEJ8 643 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 MIB1Q86YT6 1006 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 FAM71AQ8IYT1 594 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 NETO2Q8NC67 525 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 IL31RAQ8NI17 732 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TCF7L2Q9NQB0 619 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 AVENQ9NQS1 362 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TBC1D23Q9NUY8 699 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 UTP6Q9NYH9 597 aaKnown RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 A8MUI8 341 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TAF6P49848 677 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 PKNOX1P55347 436 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 TAS2R40P59535 323 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 KCNT2Q6UVM3 1135 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CCDC81Q6ZN84 652 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 ZSCAN18Q8TBC5 510 aaPredicted RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 APOPT1Q96IL0 206 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 GCNAQ96QF7 691 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 APOL5Q9BWW9 433 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 KLHL4Q9C0H6 718 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 C12orf65Q9H3J6 166 aaKnown RBP11.07□□□□□ -0.64
CCDC40-204ENST00000397545 ACOT9Q9Y305 439 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 MYO9BQ13459 2157 aa11.07□□□□□ -0.64
CCDC40-204ENST00000397545 CYP3A7-CYP3A51PA0A087WV96 503 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 PEX1O43933 1283 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 MAN1A2O60476 641 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 UPP2O95045 317 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 LSM8O95777 96 aaKnown RBP11.06□□□□□ -0.64
CCDC40-204ENST00000397545 NUDT17P0C025 328 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 CYP3A7P24462 503 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SLC1A6P48664 564 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SLC25A3Q00325 362 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SLC20A2Q08357 652 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SPIRE1Q08AE8 756 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 MAMLD1Q13495 774 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 DMC1Q14565 340 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 CYP2R1Q6VVX0 501 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 WDR49Q8IV35 697 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SHC3Q92529 594 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 EDEM1Q92611 657 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 MIEF2Q96C03 454 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 PCDHB18PQ96TA0 734 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 THUMPD3Q9BV44 507 aaKnown RBP11.06□□□□□ -0.64
CCDC40-204ENST00000397545 PKP3Q9Y446 797 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SLC30A1Q9Y6M5 507 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 SAC3D1A6NKF1 404 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 H0Y626 953 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 TULP2O00295 520 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 DNM1LO00429 736 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 TRIM16O95361 564 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 HMGCRP04035 888 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 ZNF23P17027 643 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 PTDSS1P48651 473 aaKnown RBP11.06□□□□□ -0.64
CCDC40-204ENST00000397545 TGFB2P61812 414 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 MGAT5Q09328 741 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 LRRC74AQ0VAA2 488 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 GTF2H3Q13889 308 aa11.06□□□□□ -0.64
CCDC40-204ENST00000397545 DPYSL3Q14195 570 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms