RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 ARFGAP1Q8N6T3 406 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TMEM35BQ8NCS4 154 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 REPS2Q8NFH8 660 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 OR6Y1Q8NGX8 325 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TTC17Q96AE7 1141 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TRIM11Q96F44 468 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 OTUD5Q96G74 571 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 VPS50Q96JG6 964 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CFAP57Q96MR6 1250 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SMYD3Q9H7B4 428 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 NRDE2Q9H7Z3 1164 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 AS3MTQ9HBK9 375 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SLC17A7Q9P2U7 560 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAGED2Q9UNF1 606 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 DMTF1Q9Y222 760 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAFBQ9Y5Q3 323 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 EVPLQ92817 2033 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 hCG_1818297A0A087WSY0 165 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SYNJ2BP-COX16A0A087WUM0 186 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 E2F8A0AVK6 867 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CFAP69A5D8W1 941 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 PMM2O15305 246 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MSCO60682 206 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 DKC1O60832 514 aaKnown RBP eCLIP5.2□□□□□ -1.58
SSR1-202ENST00000397511 SERPINB7O75635 380 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 LDHAP00338 332 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 ASS1P00966 412 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 ALDH2P05091 517 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 NFICP08651 508 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 F7P08709 466 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 ESRRAP11474 423 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 UQCRBP14927 111 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 S100A1P23297 94 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAN1A1P33908 653 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CDKN2BP42772 138 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 RAB15P59190 212 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 GPX6P59796 221 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 YWHAGP61981 247 aaKnown RBP eCLIP5.2□□□□□ -1.58
SSR1-202ENST00000397511 PPIDQ08752 370 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 LPIN1Q14693 890 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CCDC153Q494R4 210 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 FAM102AQ5T9C2 384 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 SLFN12LQ6IEE8 588 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 Q6ZNX1 250 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CATSPERGQ6ZRH7 1159 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CENPUQ71F23 418 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TRABD2AQ86V40 505 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 LRRC6Q86X45 466 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 PHF13Q86YI8 300 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 IGDCC3Q8IVU1 814 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 RCOR2Q8IZ40 523 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 ZCCHC9Q8N567 271 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.2□□□□□ -1.58
SSR1-202ENST00000397511 ALLCQ8N6M5 410 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SCAIQ8N9R8 606 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 SPATA18Q8TC71 538 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MAML1Q92585 1016 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 ZBED3Q96IU2 234 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 HEXIM2Q96MH2 286 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 PRICKLE1Q96MT3 831 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 CAMKK2Q96RR4 588 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 TTC1Q99614 292 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CXCL16Q9H2A7 254 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 USP29Q9HBJ7 922 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 PDGFCQ9NRA1 345 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.2□□□□□ -1.587e-7■□□□□ 11
SSR1-202ENST00000397511 ZDHHC7Q9NXF8 308 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 EURLQ9NYK6 297 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 COX16Q9P0S2 106 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MARCOQ9UEW3 520 aaPredicted RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 LGALS13Q9UHV8 139 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 XPO7Q9UIA9 1087 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 NUMBLQ9Y6R0 609 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 MYO18AQ92614 2054 aaKnown RBP5.2□□□□□ -1.58
SSR1-202ENST00000397511 LOXHD1Q8IVV2 1947 aa5.2□□□□□ -1.58
SSR1-202ENST00000397511 CCDC195A0A1B0GUA6 201 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CCDC162PA2VCL2 907 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 M0QYV0 167 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ATP2A1O14983 1001 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 HCRTO43612 131 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ZC3H11AO75152 810 aaKnown RBP eCLIP5.19□□□□□ -1.58
SSR1-202ENST00000397511 TOM1L1O75674 476 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TCEA3O75764 348 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 STK10O94804 968 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 TMEM63AO94886 807 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 PGM3O95394 542 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TOP3BO95985 862 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CLPTM1O96005 669 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 VTNP04004 478 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ERBB2P04626 1255 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RBP3P10745 1247 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 TBXAS1P24557 533 aaPredicted RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 NFKBIAP25963 317 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 ARL2P36404 184 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 CPA2P48052 419 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RAP1GDS1P52306 607 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 VCPP55072 806 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 CDH6P55285 790 aa5.19□□□□□ -1.58
SSR1-202ENST00000397511 RPL26P61254 145 aaKnown RBP5.19□□□□□ -1.58
SSR1-202ENST00000397511 XIAPP98170 497 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms