RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 ANLNQ9NQW6 1124 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 RBM12Q9NTZ6 932 aaKnown RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 SFMBT1Q9UHJ3 866 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 FZD10Q9ULW2 581 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 I6L893 689 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 IRAK2O43187 625 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 LPXNO60711 386 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 C8AP07357 584 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 PTPN7P35236 360 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 CCDC149Q6ZUS6 474 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 RSRC2Q7L4I2 434 aaKnown RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 ADAT2Q7Z6V5 191 aaKnown RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 NOA1Q8NC60 698 aaKnown RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 KCTD6Q8NC69 237 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 FAM71BQ8TC56 605 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 RNF139Q8WU17 664 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 ARNTL2Q8WYA1 636 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 NAP1L3Q99457 506 aaPredicted RBP28.61■■■□□ 2.17
CPNE1-203ENST00000397442 TMPRSS4Q9NRS4 437 aa28.61■■■□□ 2.17
CPNE1-203ENST00000397442 TRANK1O15050 2925 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 EPOPA6NHQ4 379 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 CLASP2O75122 1294 aaKnown RBP28.6■■■□□ 2.17
CPNE1-203ENST00000397442 ADCY2Q08462 1091 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 KLF1Q13351 362 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-203ENST00000397442 PLD1Q13393 1074 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 SIX1Q15475 284 aaPredicted RBP28.6■■■□□ 2.17
CPNE1-203ENST00000397442 CLUL1Q15846 466 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 PDZD8Q8NEN9 1154 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 HEMGNQ9BXL5 484 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 SLC28A3Q9HAS3 691 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 MTMR10Q9NXD2 777 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 AP4E1Q9UPM8 1137 aa28.6■■■□□ 2.17
CPNE1-203ENST00000397442 hCG_1818297A0A087WSY0 165 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 ZNF840PA6NDX5 716 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 EFCAB8A8MWE9 144 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 C1RP00736 705 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 KRT10P13645 584 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 CDH6P55285 790 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 PPP2R5EQ16537 467 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 DPYSL2Q16555 572 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 TFDP3Q5H9I0 405 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 NTAN1Q96AB6 310 aa28.59■■■□□ 2.17
CPNE1-203ENST00000397442 KRIT1O00522 736 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 MSI1O43347 362 aaKnown RBP28.58■■■□□ 2.17
CPNE1-203ENST00000397442 TBX18O95935 607 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 L1CAMP32004 1257 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 GBP1P32455 592 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ADRA1BP35368 520 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 RGS19P49795 217 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 DPYSL3Q14195 570 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ODF2Q5BJF6 829 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 PSTKQ8IV42 348 aaKnown RBP28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ZNF276Q8N554 614 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 SLC22A17Q8WUG5 538 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ZNF512Q96ME7 567 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-203ENST00000397442 PRO3102Q9H379 93 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 CCSER2Q9H7U1 834 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 PCDH18Q9HCL0 1135 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ZNF334Q9HCZ1 680 aaPredicted RBP28.58■■■□□ 2.17
CPNE1-203ENST00000397442 ASB3Q9Y575 518 aa28.58■■■□□ 2.17
CPNE1-203ENST00000397442 CTIFO43310 598 aaKnown RBP28.58■■■□□ 2.16
CPNE1-203ENST00000397442 IL4RP24394 825 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 SCAPQ12770 1279 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 PDK2Q15119 407 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 TAF12Q16514 161 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 TMEM150AQ86TG1 271 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 ITIH5Q86UX2 942 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 GDPD5Q8WTR4 605 aa28.58■■■□□ 2.16
CPNE1-203ENST00000397442 GTF2F1P35269 517 aaKnown RBP eCLIP28.57■■■□□ 2.166e-10■■■□□ 14.7
CPNE1-203ENST00000397442 AIF1P55008 147 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 MMRN1Q13201 1228 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 ADGRD2Q7Z7M1 963 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 PYROXD2Q8N2H3 581 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 SERPINB11Q96P15 392 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 DHX35Q9H5Z1 703 aaKnown RBP28.57■■■□□ 2.16
CPNE1-203ENST00000397442 WDCPQ9H6R7 721 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 IL21Q9HBE4 155 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 OLA1Q9NTK5 396 aaKnown RBP28.57■■■□□ 2.16
CPNE1-203ENST00000397442 EFR3BQ9Y2G0 817 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 ANAPC1Q9H1A4 1944 aa28.57■■■□□ 2.16
CPNE1-203ENST00000397442 PDE4DIPQ5VU43 2346 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 TLR5O60602 858 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 LRG1P02750 347 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 EPCAMP16422 314 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 CETN2P41208 172 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 SND1Q7KZF4 910 aaKnown RBP eCLIP28.56■■■□□ 2.16
CPNE1-203ENST00000397442 MMGT1Q8N4V1 131 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 PRELID2Q8N945 189 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 TSC1Q92574 1164 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 KCTD15Q96SI1 283 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-203ENST00000397442 CALN1Q9BXU9 219 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 LRRC3Q9BY71 257 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 LMAN2LQ9H0V9 348 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 NOL12Q9UGY1 213 aaKnown RBP eCLIP28.56■■■□□ 2.16
CPNE1-203ENST00000397442 V9GYY5 206 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-203ENST00000397442 OBSL1O75147 1896 aa28.56■■■□□ 2.16
CPNE1-203ENST00000397442 PER2O15055 1255 aa28.55■■■□□ 2.16
CPNE1-203ENST00000397442 EFEMP1Q12805 493 aa28.55■■■□□ 2.16
CPNE1-203ENST00000397442 C10orf120Q5SQS8 335 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms