RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TRUB2O95900 331 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 DESP17661 470 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 TFE3P19532 575 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 GBP2P32456 591 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 AVPR1AP37288 418 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 PTPN9P43378 593 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 NAP1L1P55209 391 aaKnown RBP24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 ATP11AP98196 1134 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 CDO1Q16878 200 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 HS1BP3Q53T59 392 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 POTEHQ6S545 545 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 CMTM8Q8IZV2 173 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 FNIP1Q8TF40 1166 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 NT5C3BQ969T7 300 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.61■■□□□ 1.535e-7■■■■■ 27.2
TSPAN4-203ENST00000397397 GDE1Q9NZC3 331 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 COX16Q9P0S2 106 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 IP6K2Q9UHH9 426 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 SALL4Q9UJQ4 1053 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 CDH7Q9ULB5 785 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 A0A0C4DFX4 3053 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 SLC12A8A0AV02 714 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 DLL1O00548 723 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 CCP110O43303 1012 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 BUB1O43683 1085 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 GBP1P32455 592 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 ZNF252P-AS1Q0IIN9 211 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 SERPINB11Q96P15 392 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 MYADMQ96S97 322 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 LZTFL1Q9NQ48 299 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 DDIT4Q9NX09 232 aa24.61■■□□□ 1.53
TSPAN4-203ENST00000397397 MACROD2A1Z1Q3 448 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 MSI1O43347 362 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 ARHGAP25P42331 645 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 HADHBP55084 474 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 SLC7A9P82251 487 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 NME3Q13232 169 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 ARHGAP29Q52LW3 1261 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 OTUD1Q5VV17 481 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 ZNF662Q6ZS27 426 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 ZSCAN18Q8TBC5 510 aaPredicted RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 ADAM33Q9BZ11 813 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 SMG9Q9H0W8 520 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 SMPD4Q9NXE4 827 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 TRMT1Q9NXH9 659 aaKnown RBP24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 GUCA1BQ9UMX6 200 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 PAXBP1Q9Y5B6 917 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 CPQQ9Y646 472 aa24.6■■□□□ 1.53
TSPAN4-203ENST00000397397 HELZP42694 1942 aaKnown RBP24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 TMEM110-MUSTN1A8MSY1 372 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 IGLV3-25P01717 112 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 HMBSP08397 361 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 DEUP1Q05D60 604 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 PIGHQ14442 188 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 MESDQ14696 234 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 SH3PXD2AQ5TCZ1 1133 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 PTCRAQ6ISU1 281 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 FAM172AQ8WUF8 416 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 KLF16Q9BXK1 252 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 LCMT1Q9UIC8 334 aa24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 NUP210Q8TEM1 1887 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-203ENST00000397397 IRAK2O43187 625 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 F9P00740 461 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 BMP1P13497 986 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 TBX4P57082 545 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 COG7P83436 770 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 TRIP4Q15650 581 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 PUS10Q3MIT2 529 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 SND1Q7KZF4 910 aaKnown RBP eCLIP24.58■■□□□ 1.535e-7■■■□□ 16.2
TSPAN4-203ENST00000397397 STRADAQ7RTN6 431 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 OTOP3Q7RTS5 596 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 ARID3BQ8IVW6 561 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 CENPIQ92674 756 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 PGAP3Q96FM1 320 aaPredicted RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 CALR3Q96L12 384 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 GKN1Q9NS71 199 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 CALCOCO1Q9P1Z2 691 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 ARHGAP26Q9UNA1 814 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 USTQ9Y2C2 406 aa24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 HBS1LQ9Y450 684 aaKnown RBP24.58■■□□□ 1.53
TSPAN4-203ENST00000397397 VCANP13611 3396 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 DOCK8Q8NF50 2099 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 RNF8O76064 485 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 PROSCO94903 275 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 IRF1P10914 325 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 RDXP35241 583 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 KPNA1P52294 538 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 NNTQ13423 1086 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 SMAD2Q15796 467 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 IFI16Q16666 785 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 RAB6CQ53S08 254 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 FAM78AQ5JUQ0 283 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 REXO1L1PQ8IX06 675 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 TPCN2Q8NHX9 752 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 USP13Q92995 863 aaPredicted RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 ZFRQ96KR1 1074 aaKnown RBP24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 RAB6CQ9H0N0 254 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 PIGVQ9NUD9 493 aa24.57■■□□□ 1.52
TSPAN4-203ENST00000397397 TDP1Q9NUW8 608 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms