RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 GPR153Q6NV75 609 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 SCYL2Q6P3W7 929 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 KATNAL2Q8IYT4 538 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 SMG7Q92540 1137 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 NTAN1Q96AB6 310 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 RBM41Q96IZ5 413 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 PBKQ96KB5 322 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 CARD9Q9H257 536 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 MARCH2Q9P0N8 246 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 RASAL2Q9UJF2 1139 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 PACSIN2Q9UNF0 486 aaPredicted RBP24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 HBS1LQ9Y450 684 aaKnown RBP24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 SAR1BQ9Y6B6 198 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 MTCH2Q9Y6C9 303 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 MYO7AQ13402 2215 aa24.53■■□□□ 1.52
TSPAN4-202ENST00000397396 DDX3YO15523 660 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 OAS1P00973 400 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 CCR1P32246 355 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 PGFP49763 221 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 TAS2R40P59535 323 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 EFEMP1Q12805 493 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 PPP2R5DQ14738 602 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 TRIP4Q15650 581 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 ZFYVE27Q5T4F4 411 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 ACBD5Q5T8D3 534 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 TMEM150AQ86TG1 271 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 ARFGAP1Q8N6T3 406 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 VN1R2Q8NFZ6 395 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 RNF34Q969K3 372 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 ZNF707Q96C28 371 aaPredicted RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 ATXN3LQ9H3M9 355 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 CCSER2Q9H7U1 834 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 PIGVQ9NUD9 493 aa24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.52■■□□□ 1.521e-6■■■□□ 18.3
TSPAN4-202ENST00000397396 DNMT3BQ9UBC3 853 aaKnown RBP24.52■■□□□ 1.52
TSPAN4-202ENST00000397396 SYNJ2BP-COX16A0A087WUM0 186 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 TFE3P19532 575 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 CXCR3P49682 368 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 PITX1P78337 314 aaPredicted RBP24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 COG7P83436 770 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 RING1Q06587 406 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 CLUL1Q15846 466 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 SH3PXD2AQ5TCZ1 1133 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 ANKRD54Q6NXT1 300 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 GAREM2Q75VX8 874 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 HS6ST3Q8IZP7 471 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 ADAM32Q8TC27 787 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 WDCPQ9H6R7 721 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 ZWILCHQ9H900 591 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 COX16Q9P0S2 106 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 PCSK1NQ9UHG2 260 aa24.51■■□□□ 1.51
TSPAN4-202ENST00000397396 KCNK3O14649 394 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 APOEP02649 317 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 GJC1P36383 396 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 PEX5P50542 639 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 TBX4P57082 545 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 ADAM15Q13444 863 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 EIF4EBP2Q13542 120 aaPredicted RBP24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 EFHC2Q5JST6 749 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 ERMARDQ5T6L9 678 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 SEL1L2Q5TEA6 688 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 DAB2IPQ5VWQ8 1189 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 FAM131BQ86XD5 332 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 CPNE8Q86YQ8 564 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 MAP7D3Q8IWC1 876 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 EXD1Q8NHP7 514 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 KRT35Q92764 455 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 OSBPL9Q96SU4 736 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 WDR6Q9NNW5 1121 aaKnown RBP24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 SFMBT1Q9UHJ3 866 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 SLC12A6Q9UHW9 1150 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 TRIOBPQ9H2D6 2365 aa24.5■■□□□ 1.51
TSPAN4-202ENST00000397396 CHD9Q3L8U1 2897 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 TRAV19A0A0A6YYK7 116 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 A0A1W2PRU2 124 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 SOX1O00570 391 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 COCHO43405 550 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 ZRANB2O95218 330 aaKnown RBP eCLIP24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 GLP2RO95838 553 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 OLFM2O95897 454 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 KRT1P04264 644 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 GTF2F1P35269 517 aaKnown RBP eCLIP24.49■■□□□ 1.515e-7■■■■■ 34.9
TSPAN4-202ENST00000397396 DNA2P51530 1060 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 ZNF135P52742 658 aaPredicted RBP24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 SCAPQ12770 1279 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 NUGGCQ68CJ6 796 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 VSIG1Q86XK7 387 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 PLD4Q96BZ4 506 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 ADAM33Q9BZ11 813 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 TRPC7Q9HCX4 862 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 HCFC1R1Q9NWW0 138 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 RNF14Q9UBS8 474 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 NUDT5Q9UKK9 219 aa24.49■■□□□ 1.51
TSPAN4-202ENST00000397396 LAMA3Q16787 3333 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 SLC12A8A0AV02 714 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 FANCGO15287 622 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 URI1O94763 535 aaPredicted RBP24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 RARAP10276 462 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 IGFBP4P22692 258 aa24.48■■□□□ 1.51
TSPAN4-202ENST00000397396 IL1R2P27930 398 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms