RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 NUDT14O95848 222 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 RBP5P82980 135 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PLA2G4FQ68DD2 849 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 MYO1HQ8N1T3 1032 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CHORDC1Q9UHD1 332 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ICE1Q9Y2F5 2266 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 A0A1B0GTH6 734 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PSMD14O00487 310 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 TADA2AO75478 443 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 AP1G2O75843 785 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 PDGFRBP09619 1106 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 NCAM1P13591 858 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 COMTP21964 271 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ACADSBP45954 432 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 KBTBD2Q8IY47 623 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 ANKRD7Q92527 254 aa10.6□□□□□ -0.71
COL4A4-201ENST00000396625 CRNNQ9UBG3 495 aaPredicted RBP10.6□□□□□ -0.71
COL4A4-201ENST00000396625 C10orf120Q5SQS8 335 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 EIF3MQ7L2H7 374 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RNF149Q8NC42 400 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 ITIH6Q6UXX5 1313 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 PLA2G6O60733 806 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RTN3O95197 1032 aaPredicted RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 LDLRP01130 860 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 POU5F1Q01860 360 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 STRA8Q7Z7C7 330 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 KLHL32Q96NJ5 620 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 C12orf4Q9NQ89 552 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 KRT36O76013 467 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SEC24AO95486 1093 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 GPD1P21695 349 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SPIRE1Q08AE8 756 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SAPCD2Q86UD0 394 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 TSPAN14Q8NG11 270 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RASSF5Q8WWW0 418 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 GPR108Q9NPR9 543 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 NCKIPSDQ9NZQ3 722 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 CDC42BPAQ5VT25 1732 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 CD3EAPO15446 510 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 MYLPFQ96A32 169 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 LENG1Q96BZ8 264 aaPredicted RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RACGAP1Q9H0H5 632 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 STARD13Q9Y3M8 1113 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RFC5P40937 340 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 CCR4P51679 360 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SUZ12Q15022 739 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 NR6A1Q15406 480 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 DAW1Q8N136 415 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 OXER1Q8TDS5 423 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 FNIP1Q8TF40 1166 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 EEF1AKMT1Q8WVE0 214 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RNF145Q96MT1 663 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 TCF7L2Q9NQB0 619 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 STX16-NPEPL1H3BU86 382 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 STX16O14662 325 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 RBMXL2O75526 392 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 UMPSP11172 480 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 SPATA31E1Q6ZUB1 1445 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 UQCRBP14927 111 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 TFDP3Q5H9I0 405 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 MAGEB10Q96LZ2 347 aaPredicted RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 UGT2B28Q9BY64 529 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
COL4A4-201ENST00000396625 TRMT13Q9NUP7 481 aaKnown RBP10.59□□□□□ -0.71
COL4A4-201ENST00000396625 USF2Q15853 346 aaPredicted RBP10.58□□□□□ -0.71
COL4A4-201ENST00000396625 CHP1Q99653 195 aa10.58□□□□□ -0.71
COL4A4-201ENST00000396625 ELL3Q9HB65 397 aaPredicted RBP10.58□□□□□ -0.71
COL4A4-201ENST00000396625 RRN3Q9NYV6 651 aa10.58□□□□□ -0.71
COL4A4-201ENST00000396625 LNPEPQ9UIQ6 1025 aa10.58□□□□□ -0.71
COL4A4-201ENST00000396625 C15orf41Q9Y2V0 281 aa10.58□□□□□ -0.71
COL4A4-201ENST00000396625 ASB14A6NK59 587 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 UBDO15205 165 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 COILP38432 576 aaPredicted RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SCRN3Q0VDG4 424 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 KCNB1Q14721 858 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PI16Q6UXB8 463 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 METTL5Q9NRN9 209 aaKnown RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ADPRHL2Q9NX46 363 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 DNAJC16Q9Y2G8 782 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PP2D1A8MPX8 630 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 UBOX5O94941 541 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 C5orf22Q49AR2 442 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ADGRF4Q8IZF3 695 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SPPL2AQ8TCT8 520 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 NT5C1AQ9BXI3 368 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 KCNF1Q9H3M0 494 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 LY9Q9HBG7 655 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ASXL2Q76L83 1435 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PRKCBP05771 671 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 CHRNGP07510 517 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 ATF4P18848 351 aaPredicted RBP10.58□□□□□ -0.72
COL4A4-201ENST00000396625 FGFR2P21802 821 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 PLEKHG4BQ96PX9 1271 aa10.58□□□□□ -0.72
COL4A4-201ENST00000396625 SLC38A7Q9NVC3 462 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms