RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 EHBP1Q8NDI1 1231 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 OLIG1Q8TAK6 271 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 HMGB4Q8WW32 186 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 EDEM1Q92611 657 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 TCEAL3Q969E4 200 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 XPO6Q96QU8 1125 aaKnown RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 RTKNQ9BST9 563 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 HESX1Q9UBX0 185 aa19.19■□□□□ 0.66
FXN-203ENST00000396366 AGO1Q9UL18 857 aaKnown RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 CIZ1Q9ULV3 898 aaPredicted RBP19.19■□□□□ 0.66
FXN-203ENST00000396366 TCRBV21S2A2A0A5A6 115 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 BICDL2A1A5D9 508 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 YJEFN3A6XGL0 299 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 E7ENQ6 273 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 SLC30A4O14863 429 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 RHOBTB1O94844 696 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 LCP1P13796 627 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 CORO1AP31146 461 aaKnown RBP19.18■□□□□ 0.66
FXN-203ENST00000396366 RGS7P49802 495 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 COG7P83436 770 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 CREB5Q02930 508 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 PAK1Q13153 545 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 ELF2Q15723 593 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 HSF5Q4G112 596 aaPredicted RBP19.18■□□□□ 0.66
FXN-203ENST00000396366 AASDHQ4L235 1098 aaPredicted RBP19.18■□□□□ 0.66
FXN-203ENST00000396366 NETO1Q8TDF5 533 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 CDK5RAP1Q96SZ6 601 aaKnown RBP19.18■□□□□ 0.66
FXN-203ENST00000396366 POLMQ9NP87 494 aaPredicted RBP19.18■□□□□ 0.66
FXN-203ENST00000396366 BCCIPQ9P287 314 aaKnown RBP eCLIP19.18■□□□□ 0.66
FXN-203ENST00000396366 KIAA1257Q9ULG3 409 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 STARD13Q9Y3M8 1113 aa19.18■□□□□ 0.66
FXN-203ENST00000396366 ALDH1A2O94788 518 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 BRD2P25440 801 aaKnown RBP19.17■□□□□ 0.66
FXN-203ENST00000396366 DGKGP49619 791 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 PREPLQ4J6C6 727 aaPredicted RBP19.17■□□□□ 0.66
FXN-203ENST00000396366 FYB2Q5VWT5 728 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 BSPRYQ5W0U4 402 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 PMS2CLQ68D20 193 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 PMF1Q6P1K2 205 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 FOXR2Q6PJQ5 311 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 LCLAT1Q6UWP7 414 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 PGBD3Q8N328 593 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 C12orf50Q8NA57 414 aaPredicted RBP19.17■□□□□ 0.66
FXN-203ENST00000396366 KCNV2Q8TDN2 545 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 KCTD13Q8WZ19 329 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 KREMEN1Q96MU8 473 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 IPO9Q96P70 1041 aaKnown RBP19.17■□□□□ 0.66
FXN-203ENST00000396366 MED15Q96RN5 788 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 SFMBT1Q9UHJ3 866 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 MBD1Q9UIS9 605 aaPredicted RBP19.17■□□□□ 0.66
FXN-203ENST00000396366 CLEC4EQ9ULY5 219 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 PCDHGA5Q9Y5G8 931 aa19.17■□□□□ 0.66
FXN-203ENST00000396366 A0A1W2PQF6 199 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 BCLAF3A2AJT9 711 aaKnown RBP19.16■□□□□ 0.66
FXN-203ENST00000396366 WASH3PC4AMC7 463 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 PAEPP09466 180 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 NTSR1P30989 418 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 MAP7D1Q3KQU3 841 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 NUDT18Q6ZVK8 323 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 FMNL3Q8IVF7 1028 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 RBBP8NLQ8NC74 664 aaPredicted RBP19.16■□□□□ 0.66
FXN-203ENST00000396366 CLEC4CQ8WTT0 213 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 SLC35F5Q8WV83 523 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 KIAA1468Q9P260 1216 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 FBXO10Q9UK96 956 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 STRIP2Q9ULQ0 834 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.16■□□□□ 0.66
FXN-203ENST00000396366 ZNF510Q9Y2H8 683 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.16■□□□□ 0.66
FXN-203ENST00000396366 NUP205Q92621 2012 aa19.16■□□□□ 0.66
FXN-203ENST00000396366 P4HA2O15460 535 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 CAVIN2O95810 425 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 PENKP01210 267 aaPredicted RBP19.15■□□□□ 0.66
FXN-203ENST00000396366 AFPP02771 609 aaKnown RBP19.15■□□□□ 0.66
FXN-203ENST00000396366 SETSIPP0DME0 302 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 HOXB2P14652 356 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 GABRG2P18507 467 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 P2RY2P41231 377 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 MARSP56192 900 aaKnown RBP19.15■□□□□ 0.66
FXN-203ENST00000396366 DAOAP59103 153 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 CETN1Q12798 172 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 CNGA2Q16280 664 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 KIAA1211LQ6NV74 962 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 CHPFQ8IZ52 775 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 SIX6OS1Q8N1H7 587 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 DCLK3Q9C098 648 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 INTS2Q9H0H0 1204 aaKnown RBP19.15■□□□□ 0.66
FXN-203ENST00000396366 CD248Q9HCU0 757 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 VPS45Q9NRW7 570 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 RAD54BQ9Y620 910 aa19.15■□□□□ 0.66
FXN-203ENST00000396366 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 M0QYV0 167 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 MSI1O43347 362 aaKnown RBP19.14■□□□□ 0.65
FXN-203ENST00000396366 GNA14O95837 355 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 CHKAP35790 457 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 DHPSP49366 369 aaPredicted RBP19.14■□□□□ 0.65
FXN-203ENST00000396366 ZNF132P52740 706 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 UBE2HP62256 183 aa19.14■□□□□ 0.65
FXN-203ENST00000396366 TRIP4Q15650 581 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms