RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PPP2R2DQ66LE6 453 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 MAP7D3Q8IWC1 876 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 KREMEN2Q8NCW0 462 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 MAIP1Q8WWC4 291 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 OVCA2Q8WZ82 227 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 CALN1Q9BXU9 219 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 WDR6Q9NNW5 1121 aaKnown RBP21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 SFMBT1Q9UHJ3 866 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 FZD10Q9ULW2 581 aa21.24■□□□□ 0.99
VCPKMT-202ENST00000395860 TCRBV7S2A1N4TA0A589 114 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CTIFO43310 598 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 IGLV3-25P01717 112 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CD48P09326 243 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ZDHHC11BP0C7U3 371 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 KRT10P13645 584 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 PTPN7P35236 360 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 AIF1P55008 147 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 KAZNQ674X7 775 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 PDE12Q6L8Q7 609 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ITIH5Q86UX2 942 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CASP10Q92851 521 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 RNF34Q969K3 372 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 TRMT2BQ96GJ1 504 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 MYRFLQ96LU7 910 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ZNF512Q96ME7 567 aaPredicted RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 DHX35Q9H5Z1 703 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 OLA1Q9NTK5 396 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 LAMA2P24043 3122 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 hCG_1818297A0A087WSY0 165 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 IRAK2O43187 625 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 LRG1P02750 347 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 C8AP07357 584 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CXCR3P49682 368 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ARSEP51690 589 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CLCN4P51793 760 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 CA9Q16790 459 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ERCC6LQ2NKX8 1250 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ARL13BQ3SXY8 428 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 MSANTD2Q6P1R3 559 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 DNAJB7Q7Z6W7 309 aaPredicted RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 PSTKQ8IV42 348 aaKnown RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 MMGT1Q8N4V1 131 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 SERPINB11Q96P15 392 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 HERPUD2Q9BSE4 406 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 WDCPQ9H6R7 721 aa21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 UXTQ9UBK9 157 aaPredicted RBP21.23■□□□□ 0.99
VCPKMT-202ENST00000395860 ATG2AQ2TAZ0 1938 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 TJP3O95049 919 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 BMP8BP34820 402 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 DPYSL3Q14195 570 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 PPP6R3Q5H9R7 873 aaPredicted RBP21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 EFHC2Q5JST6 749 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 KLHL7Q8IXQ5 586 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 PSMG2Q969U7 264 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 NTAN1Q96AB6 310 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 SLC28A3Q9HAS3 691 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 PCDH18Q9HCL0 1135 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 NR2E1Q9Y466 385 aa21.22■□□□□ 0.99
VCPKMT-202ENST00000395860 OBSL1O75147 1896 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 MSI1O43347 362 aaKnown RBP21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 EFEMP1Q12805 493 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 KLF1Q13351 362 aaPredicted RBP21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 DPYSL2Q16555 572 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 C10orf120Q5SQS8 335 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 ZDHHC14Q8IZN3 488 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 ARNTL2Q8WYA1 636 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 KRT12Q99456 494 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 MAK16Q9BXY0 300 aaKnown RBP21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 TRPM5Q9NZQ8 1165 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 EFR3BQ9Y2G0 817 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 ASB3Q9Y575 518 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 ANAPC1Q9H1A4 1944 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 CEP290O15078 2479 aa21.21■□□□□ 0.99
VCPKMT-202ENST00000395860 L1CAMP32004 1257 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 ADRA1BP35368 520 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 EIF4EBP2Q13542 120 aaPredicted RBP21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 NAA30Q147X3 362 aaPredicted RBP21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 SIX1Q15475 284 aaPredicted RBP21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TAZQ16635 292 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 RFX6Q8HWS3 928 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TDHQ8IZJ6 230 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 FAM71BQ8TC56 605 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 CDK5RAP1Q96SZ6 601 aaKnown RBP21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TKTL2Q9H0I9 626 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 DDX47Q9H0S4 455 aaKnown RBP21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TMPRSS4Q9NRS4 437 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TMEM51Q9NW97 253 aa21.2■□□□□ 0.99
VCPKMT-202ENST00000395860 TLR5O60602 858 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 SCAPQ12770 1279 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 MMRN1Q13201 1228 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 SNX30Q5VWJ9 437 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 CCDC70Q6NSX1 233 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 TADA2BQ86TJ2 420 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 VSIG1Q86XK7 387 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 ELMOD1Q8N336 334 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 PRELID2Q8N945 189 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 KCTD15Q96SI1 283 aaPredicted RBP21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 MAGEB5Q9BZ81 275 aa21.2■□□□□ 0.98
VCPKMT-202ENST00000395860 CCSER2Q9H7U1 834 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms