RNA–Protein interactions for RNA: ENST00000395751.8

SREBF1-203, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 4,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-203ENST00000395751 RUVBL2Q9Y230 463 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 FSCN2O14926 492 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 MGAT5Q09328 741 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PDK1Q15118 436 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 MAPRE1Q15691 268 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 FAM98BQ52LJ0 330 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 KLHL12Q53G59 568 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 TTC23Q5W5X9 447 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 SETD9Q8NE22 299 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 ENKURQ8TC29 256 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PWWP2AQ96N64 755 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 ERVK-5Q9HDB9 667 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 AVENQ9NQS1 362 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 BARX2Q9UMQ3 279 aaPredicted RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 FADS3Q9Y5Q0 445 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PRR23AA6NEV1 266 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 PRKAA2P54646 552 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 AQP4P55087 323 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 RSPH1Q8WYR4 309 aa17.49■□□□□ 0.39
SREBF1-203ENST00000395751 CPSF3Q9UKF6 684 aaKnown RBP17.49■□□□□ 0.39
SREBF1-203ENST00000395751 TRIM38O00635 465 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 GLRBP48167 497 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ACADVLP49748 655 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 TSTA3Q13630 321 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 WDR72Q3MJ13 1102 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 C6orf183Q5T699 404 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 MFSD7Q6UXD7 560 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 MAGEE2Q8TD90 523 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 FAM32AQ9Y421 112 aaKnown RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 PDLIM1O00151 329 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ZSCAN5DPP0CG00 497 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 TSHRP16473 764 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 EPS8Q12929 822 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 TLDC1Q6P9B6 456 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 TTC30AQ86WT1 665 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 PCDH20Q8N6Y1 951 aaKnown RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 TTYH3Q9C0H2 523 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 FANCEQ9HB96 536 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 PCDH12Q9NPG4 1184 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ITGA11Q9UKX5 1188 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 FANCGO15287 622 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ZC3H11AO75152 810 aaKnown RBP eCLIP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 CCNKO75909 580 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 GPD1P21695 349 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 BNC1Q01954 994 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 DPYSQ14117 519 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 PDIA6Q15084 440 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 STX19Q8N4C7 294 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 KCTD14Q9BQ13 255 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 UBA6A0AVT1 1052 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 F5H6K3 240 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 AGAP9Q5VTM2 703 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 STRA8Q7Z7C7 330 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 RP9Q8TA86 221 aaKnown RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 LNX1Q8TBB1 728 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 SLC4A5Q9BY07 1137 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 POLR3FQ9H1D9 316 aaPredicted RBP17.48■□□□□ 0.39
SREBF1-203ENST00000395751 LGALS13Q9UHV8 139 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ACOT9Q9Y305 439 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
SREBF1-203ENST00000395751 ALOX15BO15296 676 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 AMPD1P23109 780 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 ACTR3P61158 418 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TOP3AQ13472 1001 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-203ENST00000395751 ZNF568Q3ZCX4 644 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 CYP4A22Q5TCH4 519 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 UTS2BQ765I0 119 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 ZDHHC13Q8IUH4 622 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 RMDN1Q96DB5 314 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TCF12Q99081 682 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 JMJD4Q9H9V9 463 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 CXorf21Q9HAI6 301 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 FAM8A1Q9UBU6 413 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 KLHL3Q9UH77 587 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 CCNL1Q9UK58 526 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TRIM64CA6NLI5 447 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 GP5P40197 560 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 PDZK1Q5T2W1 519 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 RNF145Q96MT1 663 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TAS2R14Q9NYV8 317 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 DGCR6Q14129 220 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 GALNT18Q6P9A2 607 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 KLHDC10Q6PID8 442 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 HPS6Q86YV9 775 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 KATNAL2Q8IYT4 538 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 PDPRQ8NCN5 879 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 TAMM41Q96BW9 452 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 HSPBAP1Q96EW2 488 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 SIK1P57059 783 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 CUL2Q13617 745 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 NADK2Q4G0N4 442 aa17.47■□□□□ 0.39
SREBF1-203ENST00000395751 C6orf52Q5T4I8 152 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms