RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 AP4E1Q9UPM8 1137 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 MYL12BO14950 172 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 OXCT1P55809 520 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 LGALS3BPQ08380 585 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 SCARF1Q14162 830 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF772Q68DY9 489 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ATG14Q6ZNE5 492 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 EFCAB3Q8N7B9 438 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ADAM32Q8TC27 787 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 EMID1Q96A84 441 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ANAPC2Q9UJX6 822 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 SSNA1O43805 119 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CDC40O60508 579 aaKnown RBP eCLIP12.57□□□□□ -0.42e-9■■□□□ 13.5
SIN3A-202ENST00000394947 B3GAT3O94766 335 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CSF1RP07333 972 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 AP3M2P53677 418 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 RHOAP61586 193 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CAMK1Q14012 370 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 PTGISQ16647 500 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 RSAD1Q9HA92 442 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 CNTNAP2Q9UHC6 1331 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 PNMA8CA0A1B0GUJ8 204 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ODC1P11926 461 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 TCF7P36402 384 aaPredicted RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 IRAK1BP1Q5VVH5 260 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF621Q6ZSS3 439 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 ZCCHC23Q6ZST2 131 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 KIAA0408Q6ZU52 694 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 DNAJC1Q96KC8 554 aaKnown RBP12.57□□□□□ -0.4
SIN3A-202ENST00000394947 COMMD8Q9NX08 183 aa12.57□□□□□ -0.4
SIN3A-202ENST00000394947 RNASEH1O60930 286 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 SEC22BO75396 215 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 PSMD7P51665 324 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ITGADQ13349 1161 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 FAM171BQ6P995 826 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 MILR1Q7Z6M3 343 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 SOX10P56693 466 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 MYBPC1Q00872 1141 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 FCHO2Q0JRZ9 810 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ATAD3BQ5T9A4 648 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 LRIG3Q6UXM1 1119 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 FAM131BQ86XD5 332 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 GUF1Q8N442 669 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 KRT35Q92764 455 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 EFCAB1Q9HAE3 211 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 NMRK1Q9NWW6 199 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 AFF2P51816 1311 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 CCDC154A6NI56 674 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 MYL12AP19105 171 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 HK2P52789 917 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 STX5Q13190 355 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 POMZP3Q6PJE2 187 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 RSPH1Q8WYR4 309 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 COPS4Q9BT78 406 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 CNOT7Q9UIV1 285 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 DUSP10Q9Y6W6 482 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 SEMA3DO95025 777 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 POMCP01189 267 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 TRAF3Q13114 568 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 PYDC2Q56P42 97 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 EMC1Q8N766 993 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 MCRS1Q96EZ8 462 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 PACSIN3Q9UKS6 424 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 IFRD1O00458 451 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 LIN7AO14910 233 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 HNF4AP41235 474 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ANXA11P50995 505 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ATP2C1P98194 919 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ZIK1Q3SY52 487 aaPredicted RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 MRNIPQ6NTE8 343 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 ZCCHC8Q6NZY4 707 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 C3orf67Q6ZVT6 689 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 SUGP1Q8IWZ8 645 aaKnown RBP12.56□□□□□ -0.4
SIN3A-202ENST00000394947 PLEKHF1Q96S99 279 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 OGDHLQ9ULD0 1010 aa12.56□□□□□ -0.4
SIN3A-202ENST00000394947 GSG1L2A8MUP6 293 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CYB561D2O14569 222 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ZBTB11O95625 1053 aaPredicted RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 RHOCP08134 193 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ABCG1P45844 678 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PKN2Q16513 984 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 KYAT1Q16773 422 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 SGSM3Q96HU1 749 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ARMCX1Q9P291 453 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 THRAP10827 490 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 STK4Q13043 487 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 TSNQ15631 228 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 EFHC1Q5JVL4 640 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 AGBL2Q5U5Z8 902 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms