RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 ITGA8P53708 1063 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 EIF3EP60228 445 aaKnown RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 NME3Q13232 169 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 NFE2Q16621 373 aaPredicted RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 CTXN3Q4LDR2 81 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 C1orf228Q6PIY5 440 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 PSTKQ8IV42 348 aaKnown RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 CMTR2Q8IYT2 770 aaKnown RBP13.08□□□□□ -0.32
SSH2-203ENST00000394848 SCML4Q8N228 414 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 LRRC43Q8N309 656 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 PLD5Q8N7P1 536 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 GOLGA6L1Q8N7Z2 621 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 PCDH19Q8TAB3 1148 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 SLC7A14Q8TBB6 771 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 MAGEB5Q9BZ81 275 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 GPR62Q9BZJ7 368 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 COX16Q9P0S2 106 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 FZD10Q9ULW2 581 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 PLAAQ9Y263 795 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 LAMA3Q16787 3333 aa13.08□□□□□ -0.32
SSH2-203ENST00000394848 TDRD15B5MCY1 1934 aaKnown RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 NT5C1B-RDH14C9J2C7 533 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 APOL1O14791 398 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 MCF2LO15068 1137 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 IFNB1P01574 187 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 ETS1P14921 441 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 PMS2P54278 862 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 MRPL58Q14197 206 aaKnown RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 SLMAPQ14BN4 828 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 P3H1Q32P28 736 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 OTUD1Q5VV17 481 aaPredicted RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 NPNTQ6UXI9 565 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 BHLHA9Q7RTU4 235 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 PQLC3Q8N755 202 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 GLIS1Q8NBF1 620 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SCAMP5Q8TAC9 235 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 RSAD2Q8WXG1 361 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 FAF2Q96CS3 445 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 C10orf88Q9H8K7 445 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 ABI2Q9NYB9 513 aaPredicted RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 RRN3Q9NYV6 651 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 HCSTQ9UBK5 93 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SF3B1O75533 1304 aaKnown RBP eCLIP13.07□□□□□ -0.322e-6■■■■■ 112.2
SSH2-203ENST00000394848 RBP3P10745 1247 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 TGM2P21980 687 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 FGFR3P22607 806 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 ELAVL2Q12926 359 aaKnown RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 GPS1Q13098 491 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 BTG3Q14201 252 aaPredicted RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 NOMO1Q15155 1222 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 DARS2Q6PI48 645 aaKnown RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 RHBDF2Q6PJF5 856 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 LRIG3Q6UXM1 1119 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SCN4BQ8IWT1 228 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 TDHQ8IZJ6 230 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 EDEM1Q92611 657 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSH2-203ENST00000394848 KCTD15Q96SI1 283 aaPredicted RBP13.07□□□□□ -0.32
SSH2-203ENST00000394848 SH3GL2Q99962 352 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
SSH2-203ENST00000394848 OR6C75A6NL08 312 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 TNFRSF10BO14763 440 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 TLL1O43897 1013 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 RNF40O75150 1001 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 F9P00740 461 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 RARGP13631 454 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 STIP1P31948 543 aaKnown RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 ARL4AP40617 200 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 ZNF280DQ6N043 979 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 FUT10Q6P4F1 479 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 ZC3H18Q86VM9 953 aaKnown RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 UNC45BQ8IWX7 931 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 PYROXD2Q8N2H3 581 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 B3GALT6Q96L58 329 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 CSPG4P5Q96PW8 444 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 PABPC3Q9H361 631 aaKnown RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 CWH43Q9H720 699 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 PCDH9Q9HC56 1237 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 DDIT4Q9NX09 232 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 CWC15Q9P013 229 aaKnown RBP13.06□□□□□ -0.32
SSH2-203ENST00000394848 PCDHB5Q9Y5E4 795 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms