RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 LSP1P33241 339 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 PBX3P40426 434 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SNX16P57768 344 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 RAB15P59190 212 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 IRX1P78414 480 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 DR1Q01658 176 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 PLCB3Q01970 1234 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SLC25A11Q02978 314 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 CLUL1Q15846 466 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 LRRC38Q5VT99 294 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FBXW10Q5XX13 1052 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 OVOS1Q6IE37 1185 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SCYL2Q6P3W7 929 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FBXO46Q6PJ61 603 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 LRIG3Q6UXM1 1119 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CLEC20AQ6ZU45 233 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 MAATS1Q7Z4T9 603 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FAM35AQ86V20 835 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 LRRTM3Q86VH5 581 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 IFT20Q8IY31 132 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 RCOR2Q8IZ40 523 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 IQCKQ8N0W5 287 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 EXD1Q8NHP7 514 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CCDC26Q8TAB7 109 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 MYCBPAPQ8TBZ2 947 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CASKIN2Q8WXE0 1202 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 HSPH1Q92598 858 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 PAWRQ96IZ0 340 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 SUSD3Q96L08 255 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 B3GALT6Q96L58 329 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 HSFY1Q96LI6 401 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CASD1Q96PB1 797 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SLITRK1Q96PX8 696 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SMOQ99835 787 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TRIM51Q9BSJ1 452 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CNPY3Q9BT09 278 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 SLITRK6Q9H5Y7 841 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 LRRC4Q9HBW1 653 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 NGRNQ9NPE2 291 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 CHST7Q9NS84 486 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TMEM39AQ9NV64 488 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TMLHEQ9NVH6 421 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 ASNSD1Q9NWL6 643 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 KANSL3Q9P2N6 904 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 NFU1Q9UMS0 254 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 USP18Q9UMW8 372 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 R3HDM2Q9Y2K5 976 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 CCDC189A1A4V9 331 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 NT5C1B-RDH14C9J2C7 533 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 DAPK3O43293 454 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CYP11A1P05108 521 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CD48P09326 243 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 OR4Q2P0C623 313 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 HSPA8P11142 646 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 COL6A1P12109 1028 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 EZRP15311 586 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 BDNFP23560 247 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 ACADSBP45954 432 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 RNF144AP50876 292 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 ATXN1P54253 815 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 YWHAHQ04917 246 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 HADHQ16836 314 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 LACTB2Q53H82 288 aaPredicted RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 CCDC137Q6PK04 289 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.24□□□□□ -1.251e-9■■□□□ 12
RTN4-205ENST00000394609 GPRIN1Q7Z2K8 1008 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CEP57Q86XR8 500 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 CCDC105Q8IYK2 499 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 THEM5Q8N1Q8 247 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FAM172AQ8WUF8 416 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 MYLPFQ96A32 169 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 FAM149B1Q96BN6 582 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 TOX2Q96NM4 488 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 PEBP4Q96S96 227 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 ACBD6Q9BR61 282 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 DPH5Q9H2P9 285 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 ELAC1Q9H777 363 aaKnown RBP7.24□□□□□ -1.25
RTN4-205ENST00000394609 NRDE2Q9H7Z3 1164 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 GDF3Q9NR23 364 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 DSEQ9UL01 958 aa7.24□□□□□ -1.25
RTN4-205ENST00000394609 KIAA0100Q14667 2235 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 C3orf70A6NLC5 250 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 TBKBP1A7MCY6 615 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 NRP1O14786 923 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 PRPSAP2O60256 369 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 TRUB2O95900 331 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 CXCL10P02778 98 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 ALDH2P05091 517 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 KRT7P08729 469 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 FAM153BP0C7A2 387 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 SDC4P31431 198 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 CHRNA3P32297 505 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 IRS1P35568 1242 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 COILP38432 576 aaPredicted RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 GJA8P48165 433 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 RPL34P49207 117 aaKnown RBP7.23□□□□□ -1.25
RTN4-205ENST00000394609 TKTL1P51854 596 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 DYNLT1P63172 113 aa7.23□□□□□ -1.25
RTN4-205ENST00000394609 ADCY1Q08828 1119 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms