RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 GALK1P51570 392 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 UBXN1Q04323 297 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 GAD2Q05329 585 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 MTAPQ13126 283 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 PDCLQ13371 301 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 GAB4Q2WGN9 574 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 ZNF528Q3MIS6 628 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 FBXO43Q4G163 708 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 FSTL4Q6MZW2 842 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 MSANTD2Q6P1R3 559 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 RHBDF2Q6PJF5 856 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 Q6ZNB5 142 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 APTXQ7Z2E3 356 aaKnown RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 TMEM110Q86TL2 294 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 SLC47A2Q86VL8 602 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 MIB1Q86YT6 1006 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 SPEM1Q8N4L4 309 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 CCDC26Q8TAB7 109 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 RNF139Q8WU17 664 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 GOLGA1Q92805 767 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 ATOH1Q92858 354 aaPredicted RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 WBP2Q969T9 261 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 PLD4Q96BZ4 506 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 NOX5Q96PH1 765 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 ERGIC2Q96RQ1 377 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 TRIM62Q9BVG3 475 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 LHX5Q9H2C1 402 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 ACP6Q9NPH0 428 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 PRMT8Q9NR22 394 aaPredicted RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 SPHK2Q9NRA0 654 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 ST7Q9NRC1 585 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 CYTH4Q9UIA0 394 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 SIK3Q9Y2K2 1263 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 HBS1LQ9Y450 684 aaKnown RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 CEP83Q9Y592 693 aa8.95□□□□□ -0.98
APLF-202ENST00000394342 TNRC6BQ9UPQ9 1833 aaKnown RBP8.95□□□□□ -0.98
APLF-202ENST00000394342 SLC12A8A0AV02 714 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 C2orf72A6NCS6 295 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 SCAMP3O14828 347 aaKnown RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 HOXC11O43248 304 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 PAPSS2O95340 614 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 EGFP01133 1207 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 PNMA6AP0CW24 399 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 ATP1A3P13637 1013 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 KRT9P35527 623 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 OPRD1P41143 372 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 CCR3P51677 355 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 JAM2P57087 298 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 SNX16P57768 344 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 PPP2R5DQ14738 602 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 IQCB1Q15051 598 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 SYCP1Q15431 976 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 PREPLQ4J6C6 727 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 LY6G5CQ5SRR4 150 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 BEND5Q7L4P6 421 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 ZNF677Q86XU0 584 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 FMNL3Q8IVF7 1028 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 MAML2Q8IZL2 1156 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 WDTC1Q8N5D0 677 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 NEK11Q8NG66 645 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 CLEC4CQ8WTT0 213 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 EDEM1Q92611 657 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 PPP1R13BQ96KQ4 1090 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 FAM207AQ9NSI2 230 aaPredicted RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 RBM12Q9NTZ6 932 aaKnown RBP8.94□□□□□ -0.98
APLF-202ENST00000394342 MARK1Q9P0L2 795 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 WDR35Q9P2L0 1181 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 GPR179Q6PRD1 2367 aa8.94□□□□□ -0.98
APLF-202ENST00000394342 TP53BP1Q12888 1972 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 CHURC1-FNTBB4DL54 471 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 E5RJQ4 531 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 PAPSS1O43252 624 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 ATG13O75143 517 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 LSM8O95777 96 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 LATS1O95835 1130 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 APODP05090 189 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 GLI1P08151 1106 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 HMBSP08397 361 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 SP9P0CG40 484 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CYP11B1P15538 503 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CORO1AP31146 461 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 CDH5P33151 784 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 SOX5P35711 763 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CHKAP35790 457 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 NBL1P41271 181 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 CXCL12P48061 93 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 KLK7P49862 253 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 POLR2FP61218 127 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 TPM4P67936 248 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 NNTQ13423 1086 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 GAS6Q14393 721 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 TRIP4Q15650 581 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 ZSCAN23Q3MJ62 389 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 FILIP1LQ4L180 1135 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 NAIF1Q69YI7 327 aaPredicted RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 ZC3H14Q6PJT7 736 aaKnown RBP8.93□□□□□ -0.98
APLF-202ENST00000394342 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
APLF-202ENST00000394342 PASD1Q8IV76 773 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms