RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 PRELPP51888 382 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 PCSK7Q16549 785 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 TEKT5Q96M29 485 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 MPOP05164 745 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 VPS72Q15906 364 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 DHRSXQ8N5I4 330 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 ZNF615Q8N8J6 731 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 IRGMA1A4Y4 181 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 GJA1P17302 382 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 ACADSBP45954 432 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 PDCD4Q53EL6 469 aaKnown RBP13.76□□□□□ -0.21
USP49-203ENST00000394253 MCEEQ96PE7 176 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 AGPAT1Q99943 283 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 CST11Q9H112 138 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 CORO2BQ9UQ03 480 aa13.76□□□□□ -0.21
USP49-203ENST00000394253 SV2CQ496J9 727 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 CCNI2Q6ZMN8 369 aaPredicted RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 DEPDC4Q8N2C3 294 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PLEKHG4BQ96PX9 1271 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PCDHGA10Q9Y5H3 936 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 ZW10O43264 779 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 RECQL5O94762 991 aaPredicted RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 HLA-DQA2P01906 255 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PRKAA2P54646 552 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 BIKQ13323 160 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 FIG4Q92562 907 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TIPINQ9BVW5 301 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TCF7L2Q9NQB0 619 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 GP5P40197 560 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 XIAPP98170 497 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 C10orf107Q8IVU9 208 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 RGSL1A5PLK6 1076 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 AKAP8O43823 692 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 SNAPC5O75971 98 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 LIFRP42702 1097 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 IRAK1BP1Q5VVH5 260 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 NECAB2Q7Z6G3 386 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 KCTD17Q8N5Z5 321 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 FAM111AQ96PZ2 611 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 WDR24Q96S15 920 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 C14orf93Q9H972 538 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 OR7A10O76100 309 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 ADORA2BP29275 332 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 HECTD3Q5T447 861 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 BHLHB9Q6PI77 547 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 KBTBD2Q8IY47 623 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 REPS1Q96D71 796 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PABPC3Q9H361 631 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 ARHGEF10O15013 1369 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 SUPT7LO94864 414 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 CHRNDQ07001 517 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 DGCR6Q14129 220 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 MYBPC3Q14896 1274 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TAF5Q15542 800 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 DENND5AQ6IQ26 1287 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PIK3R3Q92569 461 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 MAP4K1Q92918 833 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 C8orf37Q96NL8 207 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 CCDC3Q9BQI4 270 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 BHLHE41Q9C0J9 482 aaPredicted RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 TRIT1Q9H3H1 467 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 ABCG2Q9UNQ0 655 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 ATP5F1P24539 256 aaPredicted RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 CDC42EP1Q00587 391 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 PLET1Q6UQ28 207 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 MTDHQ86UE4 582 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 BORCS5Q969J3 196 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 C7orf25Q9BPX7 421 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TRMT13Q9NUP7 481 aaKnown RBP13.75□□□□□ -0.21
USP49-203ENST00000394253 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
USP49-203ENST00000394253 TTC26A0AVF1 554 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 NOL4O94818 638 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 RIPK1Q13546 671 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 SPATA2LQ8IUW3 424 aaPredicted RBP13.74□□□□□ -0.21
USP49-203ENST00000394253 INO80EQ8NBZ0 244 aaPredicted RBP13.74□□□□□ -0.21
USP49-203ENST00000394253 ZHX1-C8orf76Q96EF9 292 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 DNAJC11Q9NVH1 559 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 AAR2Q9Y312 384 aaKnown RBP13.74□□□□□ -0.21
USP49-203ENST00000394253 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 ACTRT2Q8TDY3 377 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 ATXN10Q9UBB4 475 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 SNX7Q9UNH6 387 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 THRBP10828 461 aa13.74□□□□□ -0.21
USP49-203ENST00000394253 MSLNQ13421 630 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1355.7 ms