RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 TPGS1Q6ZTW0 290 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 SCD5Q86SK9 330 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 ARHGAP18Q8N392 663 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 ZNF419Q96HQ0 510 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 ACOX2Q99424 681 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 NAGPAQ9UK23 515 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 NFE2L3Q9Y4A8 694 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 GON4LQ3T8J9 2241 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.53
SNRPA1-202ENST00000394082 A0A1W2PQ27 194 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 A0A1W2PQ64 194 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 TRIM49P0CI25 452 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 TRIM49CP0CI26 452 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 NDUFA8P51970 172 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 ADAM9Q13443 819 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 UAP1L1Q3KQV9 507 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 RAB41Q5JT25 222 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 PPP1R26Q5T8A7 1209 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 KIAA1211LQ6NV74 962 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 TOGARAM2Q6ZUX3 1019 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 FOXJ1Q92949 421 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 MRGPRX1Q96LB2 322 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 TMEM121BQ9BXQ6 578 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 ADAM33Q9BZ11 813 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 WDFY3Q8IZQ1 3526 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 PCNX2A6NKB5 2137 aa18.38■□□□□ 0.53
SNRPA1-202ENST00000394082 STX10O60499 249 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 KLKB1P03952 638 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 CFIP05156 583 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 MAPK8P45983 427 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 ATXN3P54252 364 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 FOXC1Q12948 553 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 SLC14A1Q13336 389 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 FYB2Q5VWT5 728 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 ARHGAP17Q68EM7 881 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 CPXM2Q8N436 756 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 HDDC3Q8N4P3 179 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 FBXL13Q8NEE6 735 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 DEFB124Q8NES8 71 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 SCAND2PQ9GZW5 306 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 DNAAF2Q9NVR5 837 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 SUSD2Q9UGT4 822 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 PCDH15Q96QU1 1955 aa18.37■□□□□ 0.53
SNRPA1-202ENST00000394082 ARHGAP33O14559 1287 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 SYPP08247 313 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 CD58P19256 250 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 WASP42768 502 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 EIF4HQ15056 248 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 SYCP2LQ5T4T6 812 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 KRBA2Q6ZNG9 492 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 SLC41A1Q8IVJ1 513 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 FAM217AQ8IXS0 508 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 JAKMIP2Q96AA8 810 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 TMEM176AQ96HP8 235 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 HEXIM2Q96MH2 286 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 SLC2A11Q9BYW1 496 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 RAB20Q9NX57 234 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 THAP10Q9P2Z0 257 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 NUDT5Q9UKK9 219 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 NEUROG3Q9Y4Z2 214 aa18.36■□□□□ 0.53
SNRPA1-202ENST00000394082 SPEGQ15772 3267 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 C1QTNF9BB2RNN3 333 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 H0Y626 953 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 MDM4O15151 490 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 OPHN1O60890 802 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 TRIM16O95361 564 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 C1QTNF9P0C862 333 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 MFAP3P55082 362 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 SLC8A3P57103 927 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 STARD3Q14849 445 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 PM20D1Q6GTS8 502 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 TRIML1Q8N9V2 468 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 ANKRD52Q8NB46 1076 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 SLC4A11Q8NBS3 891 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 UCMAQ8WVF2 138 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 GATA6Q92908 595 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 CCDC34Q96HJ3 373 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 HSPA12BQ96MM6 686 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 SCNM1Q9BWG6 230 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 CISHQ9NSE2 258 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 CACNA2D2Q9NY47 1150 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 USP36Q9P275 1121 aaKnown RBP18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 STRIP2Q9ULQ0 834 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 CYP8B1Q9UNU6 501 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 MAPK8IP1Q9UQF2 711 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 STON1Q9Y6Q2 735 aa18.35■□□□□ 0.53
SNRPA1-202ENST00000394082 TIMM44O43615 452 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 NDUFS2O75306 463 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 IGLV3-19P01714 112 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 C7P10643 843 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 GNSP15586 552 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 CD6P30203 668 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 MXI1P50539 228 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 RAD23BP54727 409 aa18.34■□□□□ 0.53
SNRPA1-202ENST00000394082 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms