RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TTC13Q8NBP0 860 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 PIWIL2Q8TC59 973 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 CHURC1Q8WUH1 139 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 CNKSR2Q8WXI2 1034 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 AGAP3Q96P47 875 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 RIT2Q99578 217 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 ZSCAN9O15535 394 aaPredicted RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 USP12O75317 370 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TMCC1O94876 653 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 HMGCRP04035 888 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 EPHA3P29320 983 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 CPOXP36551 454 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 GLRBP48167 497 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 FLOT2Q14254 428 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 SH3D19Q5HYK7 790 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 LGSNQ5TDP6 509 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 NKD2Q969F2 451 aaPredicted RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 PIWIL1Q96J94 861 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 ZNF341Q9BYN7 854 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TPP1O14773 563 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 XPOTO43592 962 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TPST1O60507 370 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 KRT38O76015 456 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 SERPINA6P08185 405 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 CYP2R1Q6VVX0 501 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 UNC5AQ6ZN44 842 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TAS1R3Q7RTX0 852 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 ADGRF2Q8IZF7 708 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 LRRC43Q8N309 656 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 WDTC1Q8N5D0 677 aa16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TFB1MQ8WVM0 346 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 LENG8Q96PV6 779 aaPredicted RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 DRG1Q9Y295 367 aaKnown RBP16.91■□□□□ 0.3
PHTF1-205ENST00000393357 TAF1LQ8IZX4 1826 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 WDR27A2RRH5 827 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 ADCY6O43306 1168 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CRTAMO95727 393 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 HSPA4LO95757 839 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 C4BPAP04003 597 aaKnown RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 BPGMP07738 259 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 DHRS4L1P0CG22 281 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 MAPTP10636 758 aaKnown RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 ARSAP15289 507 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 ITGAXP20702 1163 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 OR6B2Q6IFH4 312 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 SNX32Q86XE0 403 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 PPWD1Q96BP3 646 aaKnown RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CCT7Q99832 543 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CAB39LQ9H9S4 337 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 DDX43Q9NXZ2 648 aaKnown RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 TXNDC16Q9P2K2 825 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 PSAT1Q9Y617 370 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 SLC26A4O43511 780 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 PEX10O60683 326 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 ZNF189O75820 626 aaPredicted RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CDK4P11802 303 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 SLC18A1P54219 525 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 EN1Q05925 392 aaPredicted RBP16.9■□□□□ 0.3
PHTF1-205ENST00000393357 MYBPC2Q14324 1141 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 DLG2Q15700 870 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 TTC16Q8NEE8 873 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 ADA2Q9NZK5 511 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CNTN3Q9P232 1028 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 CYTH4Q9UIA0 394 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 USP18Q9UMW8 372 aa16.9■□□□□ 0.3
PHTF1-205ENST00000393357 TGDSO95455 350 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 XRCC1P18887 633 aaPredicted RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 TYK2P29597 1187 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CDKL1Q00532 357 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 MYO1HQ8N1T3 1032 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 SPATA6LQ8N4H0 392 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 BHLHE22Q8NFJ8 381 aaPredicted RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 HAPLN3Q96S86 360 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 TTLL3Q9Y4R7 772 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CALB1P05937 261 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 MLH1P40692 756 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 PIGHQ14442 188 aaPredicted RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 SLC9B1Q4ZJI4 515 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 UGT2A3Q6UWM9 527 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CHSY1Q86X52 802 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 PHF13Q86YI8 300 aaPredicted RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 TMC2Q8TDI7 906 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 CATSPER2Q96P56 530 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ARMC7Q9H6L4 198 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 FAM49BQ9NUQ9 324 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ANKRD12Q6UB98 2062 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 SDR42E2A6NKP2 422 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ZBTB14O43829 449 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ERVK-10P10266 1014 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 P4HA1P13674 534 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 ARRB2P32121 409 aa16.89■□□□□ 0.29
PHTF1-205ENST00000393357 RPL5P46777 297 aaKnown RBP16.89■□□□□ 0.29
PHTF1-205ENST00000393357 HDAC4P56524 1084 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms