RNA–Protein interactions for RNA: ENST00000393307.5

RAB43-204, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,203 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-204ENST00000393307 KIF3CO14782 793 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SPAG7O75391 227 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 MYL4P12829 197 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 KLRC2P26717 231 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 LPIN1Q14693 890 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 PDK2Q15119 407 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 SH3PXD2AQ5TCZ1 1133 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 C3orf62Q6ZUJ4 267 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 TFB1MQ8WVM0 346 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 IFT43Q96FT9 208 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 NFKBIZQ9BYH8 718 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 ERVK-5Q9HDB9 667 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 RBM47A0AV96 593 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 CHRNA1P02708 482 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 UNGP13051 313 aaPredicted RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 HSD17B3P37058 310 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 RPL21P46778 160 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 GATMP50440 423 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 PLEKHA7Q6IQ23 1121 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 CTU1Q7Z7A3 348 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 XYLT1Q86Y38 959 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 DCLK2Q8N568 766 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 MUC3BQ9H195 1237 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 A0A0U1RQF3 1178 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 TSPAN3O60637 253 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 NOS2P35228 1153 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 ATXN1P54253 815 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 LRRC57Q8N9N7 239 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 ATP11CQ8NB49 1132 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SKA2Q8WVK7 121 aaPredicted RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 WNT8BQ93098 351 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 ZNF558Q96NG5 402 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 PAAF1Q9BRP4 392 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 SEMA4AQ9H3S1 761 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 PAK5Q9P286 719 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 ZC3H7BQ9UGR2 993 aaKnown RBP13.28□□□□□ -0.28
RAB43-204ENST00000393307 BRAFP15056 766 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 PLD1Q13393 1074 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 TMEM199Q8N511 208 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 PWWP2AQ96N64 755 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
RAB43-204ENST00000393307 MDM4O15151 490 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 CYP1A1P04798 512 aaPredicted RBP13.27□□□□□ -0.28
RAB43-204ENST00000393307 CCR1P32246 355 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 PRMT2P55345 433 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 ITPRIPL1Q6GPH6 555 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 XYLT2Q9H1B5 865 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 LHX5Q9H2C1 402 aa13.27□□□□□ -0.28
RAB43-204ENST00000393307 R3HDM2Q9Y2K5 976 aaKnown RBP13.27□□□□□ -0.28
RAB43-204ENST00000393307 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 BTNL10A8MVZ5 291 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 WEE1P30291 646 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 STIP1P31948 543 aaKnown RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 VCPP55072 806 aaKnown RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 TRIM60Q495X7 471 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 KCNT2Q6UVM3 1135 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 PARP9Q8IXQ6 854 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 KATNAL2Q8IYT4 538 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 CATSPERBQ9H7T0 1116 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 ALG13Q9NP73 1137 aaKnown RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 PMM2O15305 246 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 LRCH4O75427 683 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 SYN1P17600 705 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 RBL1P28749 1068 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 PMLP29590 882 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 AFF1P51825 1210 aaKnown RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 TBX4P57082 545 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 SYDE1Q6ZW31 735 aaPredicted RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 ZDHHC17Q8IUH5 632 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 MCUQ8NE86 351 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 TTC17Q96AE7 1141 aa13.27□□□□□ -0.29
RAB43-204ENST00000393307 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
RAB43-204ENST00000393307 TNS1Q9HBL0 1735 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 C3orf70A6NLC5 250 aaPredicted RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 HMGB1P1B2RPK0 211 aaPredicted RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 GPD2P43304 727 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 MRPS5P82675 430 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 RNF219Q5W0B1 726 aaPredicted RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 FAM47EQ6ZV65 393 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 TTC30AQ86WT1 665 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 LRRC8CQ8TDW0 803 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 VPS11Q9H270 941 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 FBXO44Q9H4M3 255 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 LSM7Q9UK45 103 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 NRXN2Q9P2S2 1712 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 CD48P09326 243 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 TCF4P15884 667 aa13.26□□□□□ -0.29
RAB43-204ENST00000393307 TKTP29401 623 aaKnown RBP13.26□□□□□ -0.29
RAB43-204ENST00000393307 TUBP50607 506 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms