RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 RFC1P35251 1148 aaPredicted RBP13.84□□□□□ -0.19
USP44-202ENST00000393091 TAF12Q16514 161 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 SYPL2Q5VXT5 272 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 ADHFE1Q8IWW8 467 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 JOSD2Q8TAC2 188 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 DEPDC1BQ8WUY9 529 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 TEKT4Q8WW24 435 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 ATXN3LQ9H3M9 355 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 CCSER2Q9H7U1 834 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 PAXBP1Q9Y5B6 917 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 CXorf51AA0A1B0GTR3 108 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 FLT3P36888 993 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 NTHL1P78549 312 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 GPR158Q5T848 1215 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 SLC35G2Q8TBE7 412 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 USP13Q92995 863 aaPredicted RBP13.83□□□□□ -0.19
USP44-202ENST00000393091 HAPLN3Q96S86 360 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 MARK1Q9P0L2 795 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 CALCOCO1Q9P1Z2 691 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 IGSF9Q9P2J2 1179 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 NAALADL1Q9UQQ1 740 aa13.83□□□□□ -0.19
USP44-202ENST00000393091 RCCD1A6NED2 376 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 PROSCO94903 275 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 RDXP35241 583 aaKnown RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 OGDHQ02218 1023 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 TAF5Q15542 800 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 CYP4V2Q6ZWL3 525 aaPredicted RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 POLNQ7Z5Q5 900 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 PRMT1Q99873 361 aaKnown RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 NUP85Q9BW27 656 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 PRDM16Q9HAZ2 1276 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 ARNTLO00327 626 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 CCDC175P0C221 793 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 HOXC13P31276 330 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 FAM78AQ5JUQ0 283 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 TAC4Q86UU9 113 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 MFSD6LQ8IWD5 586 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 UNC45BQ8IWX7 931 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 ZNF683Q8IZ20 524 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 ZNF564Q8TBZ8 553 aaPredicted RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 RXFP2Q8WXD0 754 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 ZSWIM3Q96MP5 696 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 TBCBQ99426 244 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 OSBPL2Q9H1P3 480 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 TDP1Q9NUW8 608 aa13.83□□□□□ -0.2
USP44-202ENST00000393091 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.83□□□□□ -0.2
USP44-202ENST00000393091 CHORDC1Q9UHD1 332 aaPredicted RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 MAGED2Q9UNF1 606 aaPredicted RBP13.83□□□□□ -0.2
USP44-202ENST00000393091 TICRRQ7Z2Z1 1910 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 NYNRINQ9P2P1 1898 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 ZXDBP98169 803 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 CYP4F8P98187 520 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 NUGGCQ68CJ6 796 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 ARFGAP1Q8N6T3 406 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 NDRG1Q92597 394 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 CD101Q93033 1021 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 SEPT11Q9NVA2 429 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 CCP110O43303 1012 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 STC2O76061 302 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 IPO7O95373 1038 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 TRUB2O95900 331 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 KCNA5P22460 613 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 RPL7AP62424 266 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 PTCRAQ6ISU1 281 aaPredicted RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 ACSF2Q96CM8 615 aaPredicted RBP13.82□□□□□ -0.2
USP44-202ENST00000393091 MSANTD3Q96H12 275 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 MARCH2Q9P0N8 246 aa13.82□□□□□ -0.2
USP44-202ENST00000393091 IGLV3-10A0A075B6K4 115 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 MDM4O15151 490 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 BMP1P13497 986 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 NCAM1P13591 858 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 HDCP19113 662 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 ARSEP51690 589 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 HDAC4P56524 1084 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 SEMA3BQ13214 749 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 TXNDC8Q6A555 127 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 REXO1L1PQ8IX06 675 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 TDRD5Q8NAT2 981 aaKnown RBP13.81□□□□□ -0.2
USP44-202ENST00000393091 TPCN2Q8NHX9 752 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 RNF139Q8WU17 664 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 MCEEQ96PE7 176 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 SLC2A4RGQ9NR83 387 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 PPP2R2CQ9Y2T4 447 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 CDH23Q9H251 3354 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 CTNNA2P26232 953 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 SDC4P31431 198 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 HCAR3P49019 387 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 ZP2Q05996 745 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 MPP7Q5T2T1 576 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 ACRBPQ8NEB7 543 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 ZSCAN18Q8TBC5 510 aaPredicted RBP13.81□□□□□ -0.2
USP44-202ENST00000393091 ASB2Q96Q27 587 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 SLC22A12Q96S37 553 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 TBC1D14Q9P2M4 693 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms