RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 OLFML2BQ68BL8 750 aa17.04■□□□□ 0.32
SNX9-201ENST00000392185 CARNMT1Q8N4J0 409 aa17.04■□□□□ 0.32
SNX9-201ENST00000392185 CINPQ9BW66 212 aaPredicted RBP17.04■□□□□ 0.32
SNX9-201ENST00000392185 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
SNX9-201ENST00000392185 STK25O00506 426 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 RIPK2O43353 540 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 DNAJC6O75061 913 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 PPFIA2O75334 1257 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 IFI35P80217 286 aaPredicted RBP17.03■□□□□ 0.32
SNX9-201ENST00000392185 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX9-201ENST00000392185 DBN1Q16643 649 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 ULK4Q96C45 1275 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 FRMD8Q9BZ67 464 aaPredicted RBP17.03■□□□□ 0.32
SNX9-201ENST00000392185 FRMD8P1Q9BZ68 369 aaPredicted RBP17.03■□□□□ 0.32
SNX9-201ENST00000392185 GDF3Q9NR23 364 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 OR12D3Q9UGF7 316 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 BCAP29Q9UHQ4 241 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 NAALADL1Q9UQQ1 740 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 BTNL10A8MVZ5 291 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 CILPO75339 1184 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 RAD23BP54727 409 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 DDR2Q16832 855 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 LMNTD2Q8IXW0 634 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 PPWD1Q96BP3 646 aaKnown RBP17.03■□□□□ 0.32
SNX9-201ENST00000392185 SHOC2Q9UQ13 582 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 CCDC88AQ3V6T2 1871 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 SCNN1BP51168 640 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 IKBKEQ14164 716 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 C4orf22Q6V702 233 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 DPF3Q92784 378 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 FICDQ9BVA6 458 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 VNN1O95497 513 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 CHRNB2P17787 502 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 ACAP1Q15027 740 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 RFX8Q6ZV50 586 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 LRRC34Q8IZ02 419 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 TTC30BQ8N4P2 665 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 LATS2Q9NRM7 1088 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 VPS28Q9UK41 221 aa17.03■□□□□ 0.32
SNX9-201ENST00000392185 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX9-201ENST00000392185 ATP4AP20648 1035 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 CSE1LP55060 971 aaKnown RBP17.02■□□□□ 0.32
SNX9-201ENST00000392185 TUSC3Q13454 348 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 NOCTQ9UK39 431 aaKnown RBP17.02■□□□□ 0.32
SNX9-201ENST00000392185 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
SNX9-201ENST00000392185 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 COQ4Q9Y3A0 265 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 PCDHB12Q9Y5F1 795 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 A0A1B0GUA9 196 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 GOLGA8TH3BQL2 631 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 AP3B1O00203 1094 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 ZNF844Q08AG5 666 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 PDAP1Q13442 181 aaKnown RBP17.02■□□□□ 0.32
SNX9-201ENST00000392185 ACAD11Q709F0 780 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 FAM35AQ86V20 835 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 VCX3BQ9H321 246 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 CDH9Q9ULB4 789 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
SNX9-201ENST00000392185 MYH6P13533 1939 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 OR1E1P30953 314 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 CLCNKBP51801 687 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 RABGGTBP53611 331 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 ST8SIA6P61647 398 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 TAF5Q15542 800 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 TMTC4Q5T4D3 741 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 TTC39BQ5VTQ0 682 aaPredicted RBP17.02■□□□□ 0.31
SNX9-201ENST00000392185 ILDR2Q71H61 639 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 YAF2Q8IY57 180 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 NINJ2Q9NZG7 142 aa17.02■□□□□ 0.31
SNX9-201ENST00000392185 STX7O15400 261 aaKnown RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 RPSAP08865 295 aaKnown RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 GOT1P17174 413 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 EPHB3P54753 998 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 GEMP55040 296 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 ZRANB3Q5FWF4 1079 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 MARC1Q5VT66 337 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 PMF1Q6P1K2 205 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 ATAD1Q8NBU5 361 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 SEC16BQ96JE7 1060 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 RNF157Q96PX1 679 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 MRPL9Q9BYD2 267 aaKnown RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 FAM129AQ9BZQ8 928 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 UNKQ9C0B0 810 aaKnown RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 NR2E1Q9Y466 385 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 RHOCP08134 193 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 AKT1P31749 480 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 AVPR1AP37288 418 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 GLRBP48167 497 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 CLNS1AP54105 237 aaKnown RBP17.01■□□□□ 0.31
SNX9-201ENST00000392185 MAP3K21Q5TCX8 1036 aa17.01■□□□□ 0.31
SNX9-201ENST00000392185 SLC4A11Q8NBS3 891 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms