RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NNTQ13423 1086 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 NCAPHQ15003 741 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 ANO6Q4KMQ2 910 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 FMNL3Q8IVF7 1028 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 CPXM2Q8N436 756 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 AOPEPQ8N6M6 819 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 IPO4Q8TEX9 1081 aaKnown RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 IRX2Q9BZI1 471 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 MIS12Q9H081 205 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 FBRSL1Q9HCM7 1045 aaKnown RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 ARHGEF4Q9NR80 690 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 AJAP1Q9UKB5 411 aaPredicted RBP13.24□□□□□ -0.29
GGPS1-203ENST00000391855 FANCMQ8IYD8 2048 aa13.24□□□□□ -0.29
GGPS1-203ENST00000391855 A0A0A0MRY4 1105 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CCDC163A0A0D9SF12 145 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 F8VZ95 297 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 LILRB5O75023 590 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 TULP3O75386 442 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 GABBR2O75899 941 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CYBBP04839 570 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 GLI1P08151 1106 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CNR2P34972 360 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CLCN1P35523 988 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 TNFRSF4P43489 277 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 NUGGCQ68CJ6 796 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 NAIF1Q69YI7 327 aaPredicted RBP13.23□□□□□ -0.29
GGPS1-203ENST00000391855 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 SYT13Q7L8C5 426 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 ALYREFQ86V81 257 aaKnown RBP13.23□□□□□ -0.29
GGPS1-203ENST00000391855 TMEM25Q86YD3 366 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CAMKK1Q8N5S9 505 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 KCNV2Q8TDN2 545 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 NDRG1Q92597 394 aaKnown RBP13.23□□□□□ -0.29
GGPS1-203ENST00000391855 EDEM1Q92611 657 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 FAM149B1Q96BN6 582 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 GANQ9H2C0 597 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 PDCL3Q9H2J4 239 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 ACP6Q9NPH0 428 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 ASNSD1Q9NWL6 643 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 CACNA1IQ9P0X4 2223 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 SLC8A2Q9UPR5 921 aa13.23□□□□□ -0.29
GGPS1-203ENST00000391855 PRR23AA6NEV1 266 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 E5RJQ4 531 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 K7ESF4 209 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PIK3R2O00459 728 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PAPSS1O43252 624 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 GFRA3O60609 400 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CAVIN2O95810 425 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 LMNAP02545 664 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 KLKB1P03952 638 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 HMBSP08397 361 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 NCAM1P13591 858 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TYRP14679 529 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 RING1Q06587 406 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TSSK4Q6SA08 328 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TOGARAM2Q6ZUX3 1019 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TRMT11Q7Z4G4 463 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SLC47A2Q86VL8 602 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 ZDHHC17Q8IUH5 632 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 UNC45BQ8IWX7 931 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TMEM35BQ8NCS4 154 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 MSANTD4Q8NCY6 345 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 RPLP0P6Q8NHW5 317 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 ERGIC2Q96RQ1 377 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SFMBT1Q9UHJ3 866 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 STOML2Q9UJZ1 356 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 AGO1Q9UL18 857 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SIK3Q9Y2K2 1263 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 R4GN57 208 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 NEDD8-MDP1E9PL57 170 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 K7EQS6 105 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CAPN9O14815 690 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 LSM8O95777 96 aaKnown RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 PENKP01210 267 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 IGLV3-27P01718 113 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CYP11B1P15538 503 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 CDH5P33151 784 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 ZNF165P49910 485 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 KDSRQ06136 332 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 E2F5Q15329 346 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SYCP1Q15431 976 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
GGPS1-203ENST00000391855 EFHC1Q5JVL4 640 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
GGPS1-203ENST00000391855 DENND1CQ8IV53 801 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms