RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 ALOX15BO15296 676 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 EIF3HO15372 352 aaKnown RBP eCLIP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 MDH1P40925 334 aaKnown RBP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 RABGGTBP53611 331 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 ARL4CP56559 192 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 PITX1P78337 314 aaPredicted RBP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 AUHQ13825 339 aaKnown RBP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 STAT4Q14765 748 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 HIF1AQ16665 826 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 C4orf22Q6V702 233 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 BZW1Q7L1Q6 419 aaKnown RBP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 SLC7A14Q8TBB6 771 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 SH3TC2Q8TF17 1288 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 TRIM62Q9BVG3 475 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 CNOT10Q9H9A5 744 aaKnown RBP26.15■■□□□ 1.78
SHOX2-201ENST00000389589 TMLHEQ9NVH6 421 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 USP3Q9Y6I4 520 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 H3BRJ5 948 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 TRAPPC3O43617 180 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 NME3Q13232 169 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 TNFAIP8L3Q5GJ75 292 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 EFHC2Q5JST6 749 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 LRRTM3Q86VH5 581 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 NTAN1Q96AB6 310 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 RHOBTB2Q9BYZ6 727 aa26.15■■□□□ 1.78
SHOX2-201ENST00000389589 ZNF638Q14966 1978 aaKnown RBP26.14■■□□□ 1.78
SHOX2-201ENST00000389589 ERICH4A6NGS2 130 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 PITPNM1O00562 1244 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 KCNN4O15554 427 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 F9P00740 461 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 NCAM1P13591 858 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 UNC93B1Q9H1C4 597 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 PIGVQ9NUD9 493 aa26.14■■□□□ 1.77
SHOX2-201ENST00000389589 COL4A4P53420 1690 aaPredicted RBP26.14■■□□□ 1.77
SHOX2-201ENST00000389589 A0A087WUV0 522 aaPredicted RBP26.13■■□□□ 1.77
SHOX2-201ENST00000389589 DCDC2CA8MYV0 355 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 F8W810 466 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 B4GALT3O60512 393 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 NBNO60934 754 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 GOT1P17174 413 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 ATP5DP30049 168 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 OR1G1P47890 313 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 PLEKHG4Q58EX7 1191 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 BHLHA9Q7RTU4 235 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 SPATA2LQ8IUW3 424 aaPredicted RBP26.13■■□□□ 1.77
SHOX2-201ENST00000389589 TMEM209Q96SK2 561 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 SLC12A6Q9UHW9 1150 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 SYNJ2BP-COX16A0A087WUM0 186 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 RBL1P28749 1068 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 SLCO1A2P46721 670 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 BASP1P80723 227 aaKnown RBP26.13■■□□□ 1.77
SHOX2-201ENST00000389589 LONRF1Q17RB8 773 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 SLC45A4Q5BKX6 768 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 PYROXD2Q8N2H3 581 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 MAGEB5Q9BZ81 275 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 COX16Q9P0S2 106 aa26.13■■□□□ 1.77
SHOX2-201ENST00000389589 ENPP3O14638 875 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 OAZ2O95190 189 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 SCAPQ12770 1279 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 PDIA2Q13087 525 aaKnown RBP26.12■■□□□ 1.77
SHOX2-201ENST00000389589 ANKRD22Q5VYY1 191 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 NCBP2-AS2Q69YL0 99 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 BEND5Q7L4P6 421 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 ABI1Q8IZP0 508 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 RNF139Q8WU17 664 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 SEPT8Q92599 483 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 APBB2Q92870 758 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 PCDHB7Q9Y5E2 793 aa26.12■■□□□ 1.77
SHOX2-201ENST00000389589 AMPD1P23109 780 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 ADRA1BP35368 520 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 GUCY1A3Q02108 690 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 GBE1Q04446 702 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 LRRC31Q6UY01 552 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 PPP1R21Q6ZMI0 780 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 TAOK1Q7L7X3 1001 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 ZBED8Q8IZ13 594 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 DBF4BQ8NFT6 615 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 PAK6Q9NQU5 681 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 XPO7Q9UIA9 1087 aaKnown RBP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 SF3B1O75533 1304 aaKnown RBP eCLIP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 SRRM3A6NNA2 597 aaPredicted RBP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 HACD1B0YJ81 288 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 CHADO15335 359 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 ARL13BQ3SXY8 428 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 B4GALNT4Q76KP1 1039 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 DCP1BQ8IZD4 617 aaKnown RBP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 QKIQ96PU8 341 aaKnown RBP eCLIP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 WDR6Q9NNW5 1121 aaKnown RBP26.11■■□□□ 1.77
SHOX2-201ENST00000389589 ARHGEF4Q9NR80 690 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 FBXW11Q9UKB1 542 aa26.11■■□□□ 1.77
SHOX2-201ENST00000389589 E7ESA3 106 aa26.1■■□□□ 1.77
SHOX2-201ENST00000389589 GOLGA8MH3BSY2 632 aa26.1■■□□□ 1.77
SHOX2-201ENST00000389589 SLC10A2Q12908 348 aaPredicted RBP26.1■■□□□ 1.77
SHOX2-201ENST00000389589 TTC19Q6DKK2 380 aaPredicted RBP26.1■■□□□ 1.77
SHOX2-201ENST00000389589 PDIK1LQ8N165 341 aa26.1■■□□□ 1.77
SHOX2-201ENST00000389589 FRMD8Q9BZ67 464 aaPredicted RBP26.1■■□□□ 1.77
SHOX2-201ENST00000389589 SYN3O14994 580 aa26.1■■□□□ 1.77
SHOX2-201ENST00000389589 TADA2AO75478 443 aa26.1■■□□□ 1.77
SHOX2-201ENST00000389589 IFI35P80217 286 aaPredicted RBP26.1■■□□□ 1.77
SHOX2-201ENST00000389589 KCNJ11Q14654 390 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms